Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm16373-201ENSMUST00000129517 303 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm24787-201ENSMUST00000157380 123 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm24190-201ENSMUST00000157976 216 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Mir8118-201ENSMUST00000183962 129 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm44594-201ENSMUST00000208982 407 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm7948-201ENSMUST00000212607 844 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm8942-201ENSMUST00000217892 400 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm4928-201ENSMUST00000219622 850 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 AC151730.2-201ENSMUST00000224027 475 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Olfr815-201ENSMUST00000071557 951 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm23264-201ENSMUST00000083372 107 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trav6-6A0A075B603 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.03□□□□□ -2.09
Trav6-6A0A075B603 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm16383-201ENSMUST00000118122 232 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm15231-201ENSMUST00000119174 447 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm11693-201ENSMUST00000119625 565 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm16458-201ENSMUST00000121428 502 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm14389-201ENSMUST00000140453 241 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm25185-201ENSMUST00000157754 96 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm24553-201ENSMUST00000158653 131 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm6900-201ENSMUST00000178971 342 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm24520-201ENSMUST00000179510 110 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm29553-201ENSMUST00000189692 279 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm28744-201ENSMUST00000189939 340 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm7142-201ENSMUST00000194232 586 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm43295-201ENSMUST00000201439 412 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm19253-201ENSMUST00000204279 307 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm45078-201ENSMUST00000205343 546 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm17987-201ENSMUST00000206902 603 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 AF357428-201ENSMUST00000083815 69 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.02□□□□□ -2.09
Trav6-6A0A075B603 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm25097-201ENSMUST00000104042 145 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm15282-201ENSMUST00000117707 300 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm14901-201ENSMUST00000119001 283 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm5958-201ENSMUST00000147698 297 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm22600-201ENSMUST00000157598 269 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm23033-201ENSMUST00000157996 134 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm23053-201ENSMUST00000175136 96 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm26991-201ENSMUST00000180950 620 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Mir6975-201ENSMUST00000184879 61 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms