Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm24640-201ENSMUST00000116949 126 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm22626-201ENSMUST00000116990 126 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm14086-201ENSMUST00000117152 173 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm13451-201ENSMUST00000117649 592 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm11367-201ENSMUST00000117802 120 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm15981-201ENSMUST00000119196 457 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm14792-201ENSMUST00000119725 258 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm13537-201ENSMUST00000120467 267 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm24909-201ENSMUST00000157290 280 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm24501-201ENSMUST00000158452 62 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm10319-202ENSMUST00000159439 846 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm24761-201ENSMUST00000179589 127 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm24488-201ENSMUST00000179934 127 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm25701-201ENSMUST00000179988 127 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm26431-201ENSMUST00000180199 127 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm28017-201ENSMUST00000183434 126 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm27608-201ENSMUST00000184822 162 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm29062-201ENSMUST00000186032 694 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm5285-201ENSMUST00000193089 666 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm18036-201ENSMUST00000195256 272 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm45422-201ENSMUST00000211476 246 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm18016-201ENSMUST00000216119 801 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm5750-201ENSMUST00000218711 801 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 AC123618.1-201ENSMUST00000220174 360 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gm46369-201ENSMUST00000221577 401 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 AC130821.1-201ENSMUST00000221997 293 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm14825-201ENSMUST00000113538 701 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm13396-201ENSMUST00000120617 271 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm24863-201ENSMUST00000179499 107 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm26731-201ENSMUST00000180683 543 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm27688-201ENSMUST00000183634 91 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm29147-201ENSMUST00000186846 315 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm29227-201ENSMUST00000187139 315 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm29034-201ENSMUST00000188099 315 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm28160-201ENSMUST00000191229 315 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm34176-201ENSMUST00000192621 474 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm37881-201ENSMUST00000193001 421 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm10048-201ENSMUST00000194196 372 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm37129-201ENSMUST00000195791 315 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm42428-201ENSMUST00000198677 302 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm35931-201ENSMUST00000203931 448 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm44157-201ENSMUST00000204720 410 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm44795-201ENSMUST00000205496 319 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 AC122225.1-201ENSMUST00000215641 369 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 AC126440.1-201ENSMUST00000227098 349 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm25260-201ENSMUST00000083053 134 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Gm22169-201ENSMUST00000083229 107 ntBASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf40aQ9R1C7 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Prpf40aQ9R1C7 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.59□□□□□ -1.52
Prpf40aQ9R1C7 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm14296-202ENSMUST00000108931 750 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms