Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm12881-201ENSMUST00000121191 203 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm16218-201ENSMUST00000155424 388 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm22339-201ENSMUST00000157718 62 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm44300-201ENSMUST00000196792 121 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm45071-201ENSMUST00000205353 571 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm12495-201ENSMUST00000119750 447 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm16274-201ENSMUST00000139251 592 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm26041-201ENSMUST00000158148 108 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm24666-201ENSMUST00000158937 167 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm7897-201ENSMUST00000193981 554 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm43521-201ENSMUST00000197838 255 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm43107-201ENSMUST00000198729 255 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm35570-201ENSMUST00000198730 681 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm5358-201ENSMUST00000212814 353 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Scn5aQ9JJV9 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm12656-201ENSMUST00000118149 577 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm16147-201ENSMUST00000162143 373 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm17061-201ENSMUST00000163167 499 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm25528-201ENSMUST00000180264 132 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm27477-201ENSMUST00000184649 143 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm38075-201ENSMUST00000191979 920 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm44348-201ENSMUST00000200165 122 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm44157-201ENSMUST00000204720 410 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm23447-201ENSMUST00000082798 163 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.11□□□□□ -1.91
Scn5aQ9JJV9 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Gm22817-201ENSMUST00000157448 356 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Gm14527-201ENSMUST00000179300 639 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Gm26933-201ENSMUST00000182320 827 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Gm3933-201ENSMUST00000195391 439 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Gm7530-201ENSMUST00000218466 605 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Gm10025-201ENSMUST00000079568 372 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn5aQ9JJV9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms