Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm12814-201ENSMUST00000117091 846 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm11408-201ENSMUST00000117889 519 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm14469-201ENSMUST00000118363 202 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm14835-201ENSMUST00000119039 315 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm15266-201ENSMUST00000119635 255 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm15030-201ENSMUST00000119804 484 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm14815-201ENSMUST00000120060 488 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm26476-201ENSMUST00000122618 313 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm16303-201ENSMUST00000161498 390 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm26746-201ENSMUST00000181722 487 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm26988-201ENSMUST00000183296 945 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm28474-201ENSMUST00000188501 315 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 AL772265.1-201ENSMUST00000214379 305 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 AC125523.1-201ENSMUST00000228018 934 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm10038-201ENSMUST00000077233 441 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm14981-201ENSMUST00000117325 943 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm6923-201ENSMUST00000118343 406 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm12095-201ENSMUST00000121962 816 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm23463-201ENSMUST00000122468 99 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm25105-201ENSMUST00000122477 130 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm23118-201ENSMUST00000122657 187 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm23585-201ENSMUST00000157656 102 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm25666-201ENSMUST00000157702 107 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm23865-201ENSMUST00000157723 97 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm24014-201ENSMUST00000157728 157 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm24314-201ENSMUST00000158274 123 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm21960-201ENSMUST00000181924 452 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm28598-201ENSMUST00000186490 615 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm18505-201ENSMUST00000187360 790 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm29268-201ENSMUST00000188669 615 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm29218-205ENSMUST00000190846 615 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm28978-201ENSMUST00000191120 615 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm28655-201ENSMUST00000191538 692 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm37172-201ENSMUST00000191926 615 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm8423-201ENSMUST00000211387 607 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm18441-201ENSMUST00000223539 617 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm5265-201ENSMUST00000076828 342 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm24147-201ENSMUST00000082763 144 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm26128-201ENSMUST00000083170 110 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim54Q9ERP3 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm22771-201ENSMUST00000104449 91 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Mir465c-2-201ENSMUST00000104757 81 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm15180-201ENSMUST00000117745 492 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm13454-201ENSMUST00000118166 483 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm14566-201ENSMUST00000118915 321 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm9078-201ENSMUST00000119126 617 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm22236-201ENSMUST00000157093 106 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm24550-201ENSMUST00000158648 279 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm23473-201ENSMUST00000158883 116 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm23379-201ENSMUST00000180026 107 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm18185-201ENSMUST00000186725 667 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm43232-201ENSMUST00000201346 364 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms