Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm12149-201ENSMUST00000117511 654 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm12335-201ENSMUST00000119738 327 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm11389-201ENSMUST00000121407 430 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm15263-201ENSMUST00000121556 642 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm24836-201ENSMUST00000122609 108 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm22988-201ENSMUST00000122759 144 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm24905-201ENSMUST00000158129 104 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm26271-201ENSMUST00000158349 104 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm24739-201ENSMUST00000158855 292 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm25817-201ENSMUST00000177758 121 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm24766-201ENSMUST00000179182 121 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm37617-201ENSMUST00000194309 159 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm44125-201ENSMUST00000203068 448 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm23516-201ENSMUST00000093728 107 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Vps28Q9D1C8 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm11923-201ENSMUST00000118135 508 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm12118-201ENSMUST00000119766 532 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm15244-201ENSMUST00000121122 130 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm14129-201ENSMUST00000122436 291 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm23234-201ENSMUST00000157304 134 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm17377-201ENSMUST00000165184 207 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm23152-201ENSMUST00000175322 116 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm26177-201ENSMUST00000178683 107 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm27773-201ENSMUST00000184087 78 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm43224-201ENSMUST00000201567 898 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm18488-201ENSMUST00000215082 364 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Vps28Q9D1C8 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm11577-201ENSMUST00000118030 737 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm13314-201ENSMUST00000118742 335 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm26348-201ENSMUST00000157528 240 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm24976-201ENSMUST00000158972 135 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm20693-201ENSMUST00000177431 211 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm22367-201ENSMUST00000178930 132 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm5527-201ENSMUST00000179821 642 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm8649-201ENSMUST00000181799 233 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm20574-201ENSMUST00000182867 917 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm27392-201ENSMUST00000185041 101 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm18448-201ENSMUST00000186286 599 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm42805-201ENSMUST00000196158 276 ntBASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.79□□□□□ -1.8
Vps28Q9D1C8 Gm44475-201ENSMUST00000204041 424 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms