Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm11219-201ENSMUST00000118565 358 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm7219-201ENSMUST00000119619 297 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm11896-201ENSMUST00000121105 820 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm16569-201ENSMUST00000160526 314 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm18396-201ENSMUST00000177095 361 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm27718-201ENSMUST00000183721 86 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm27445-201ENSMUST00000184484 72 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm27477-201ENSMUST00000184649 143 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm37416-201ENSMUST00000193596 318 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm43245-201ENSMUST00000197603 468 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm42850-201ENSMUST00000202094 201 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm44611-201ENSMUST00000207507 355 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm24611-201ENSMUST00000083272 107 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.49□□□□□ -1.85
Ddx28Q9CWT6 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm24430-201ENSMUST00000104077 104 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm24281-201ENSMUST00000104234 136 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm11874-201ENSMUST00000117437 130 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm13567-201ENSMUST00000118026 247 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm14566-201ENSMUST00000118915 321 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm14627-201ENSMUST00000118931 567 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm11876-201ENSMUST00000120002 269 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm14982-201ENSMUST00000121102 442 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm23167-201ENSMUST00000157155 103 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm6374-201ENSMUST00000159051 788 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm3111-201ENSMUST00000167426 490 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm26556-201ENSMUST00000180645 320 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm10292-201ENSMUST00000183142 581 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm29600-201ENSMUST00000188687 377 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm28155-201ENSMUST00000191066 151 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm44990-201ENSMUST00000203922 217 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 AC153541.1-201ENSMUST00000213786 294 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm18488-201ENSMUST00000215082 364 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm2446-201ENSMUST00000220144 772 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 AC114916.1-201ENSMUST00000228465 494 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm25481-201ENSMUST00000083221 158 ntBASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ddx28Q9CWT6 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm23256-201ENSMUST00000102235 110 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm26140-201ENSMUST00000103807 110 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms