Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm2446-201ENSMUST00000220144 772 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm11830-201ENSMUST00000120175 561 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm5379-201ENSMUST00000120973 826 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm23435-201ENSMUST00000157183 156 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm25670-201ENSMUST00000178423 107 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm26239-201ENSMUST00000178842 107 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm24267-201ENSMUST00000179841 107 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm8649-201ENSMUST00000181799 233 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm19774-201ENSMUST00000190667 114 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm8790-201ENSMUST00000194108 322 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm37399-201ENSMUST00000195224 416 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm5001-201ENSMUST00000204361 331 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm8423-201ENSMUST00000211387 607 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm46998-201ENSMUST00000221444 330 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm24292-201ENSMUST00000082888 107 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Ushbp1Q8R370 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm25169-201ENSMUST00000104190 129 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm24982-201ENSMUST00000104456 132 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm23226-201ENSMUST00000116927 103 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm15177-201ENSMUST00000120491 577 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm5287-201ENSMUST00000120666 598 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm14362-201ENSMUST00000121679 273 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm15254-201ENSMUST00000149567 273 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm25606-201ENSMUST00000158363 95 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm26988-201ENSMUST00000183296 945 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm8392-201ENSMUST00000185647 835 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm19503-201ENSMUST00000187109 241 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Trbv8-201ENSMUST00000194020 285 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm43035-201ENSMUST00000197626 517 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm8041-201ENSMUST00000199755 616 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm42758-201ENSMUST00000202146 283 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm44818-201ENSMUST00000206608 358 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm31849-201ENSMUST00000220306 375 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm10264-201ENSMUST00000220589 429 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm7753-201ENSMUST00000221007 867 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Ear14-201ENSMUST00000049559 468 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Snord21-201ENSMUST00000082519 94 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms