Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Gm29740-201ENSMUST00000193182 655 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Gm9379-201ENSMUST00000196790 646 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Gm42958-201ENSMUST00000197595 318 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Gm17893-201ENSMUST00000203017 770 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Gm46103-201ENSMUST00000217614 341 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Gm25592-201ENSMUST00000082635 131 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Snord35b-201ENSMUST00000082833 87 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Snora70-201ENSMUST00000083047 137 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.56□□□□□ -1.84
Prpf39Q8K2Z2 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm23532-201ENSMUST00000104569 112 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm12858-201ENSMUST00000121913 208 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Mir6975-201ENSMUST00000184879 61 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm28745-201ENSMUST00000190069 305 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm37097-201ENSMUST00000193676 336 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm37288-201ENSMUST00000193963 334 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm42828-201ENSMUST00000199669 469 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 AC162934.3-201ENSMUST00000223015 841 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm4987-201ENSMUST00000078326 408 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Prpf39Q8K2Z2 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm14518-201ENSMUST00000117351 542 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm12025-201ENSMUST00000117768 144 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm13082-201ENSMUST00000118877 561 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm13692-201ENSMUST00000120774 371 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm23463-201ENSMUST00000122468 99 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm23671-201ENSMUST00000157472 103 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Mir1934-201ENSMUST00000158127 83 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Mir8118-201ENSMUST00000183962 129 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm17966-201ENSMUST00000193453 594 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm44513-201ENSMUST00000206811 439 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm45273-201ENSMUST00000211559 281 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm9973-202ENSMUST00000220926 166 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Gm10242-201ENSMUST00000090064 330 ntBASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Prpf39Q8K2Z2 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Prpf39Q8K2Z2 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.53□□□□□ -1.84
Prpf39Q8K2Z2 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.53□□□□□ -1.84
Prpf39Q8K2Z2 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.53□□□□□ -1.84
Prpf39Q8K2Z2 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms