Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm5649-201ENSMUST00000217918 951 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Mir592-201ENSMUST00000102113 96 ntBASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Gm15231-201ENSMUST00000119174 447 ntBASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Gm26411-201ENSMUST00000157668 107 ntBASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Mir6363-201ENSMUST00000184880 114 ntBASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Gm37807-201ENSMUST00000194310 190 ntBASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Gm26176-201ENSMUST00000083795 105 ntBASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc28aQ8CEI3 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Snora36b-201ENSMUST00000104383 132 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm11221-201ENSMUST00000117230 597 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm14982-201ENSMUST00000121102 442 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm11797-201ENSMUST00000121336 754 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm5967-201ENSMUST00000172723 494 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm26915-201ENSMUST00000183080 748 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm17838-201ENSMUST00000205872 876 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm18892-201ENSMUST00000217628 881 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28aQ8CEI3 Gm14579-201ENSMUST00000117068 283 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Mup-ps17-201ENSMUST00000120723 218 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm13901-201ENSMUST00000137252 468 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm22858-201ENSMUST00000174972 76 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm23053-201ENSMUST00000175136 96 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm29658-201ENSMUST00000185404 230 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm7751-201ENSMUST00000212868 709 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gm7588-201ENSMUST00000216866 571 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Gm24951-201ENSMUST00000102182 109 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Mir673-201ENSMUST00000102361 91 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Gm6461-201ENSMUST00000120015 633 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Gm24240-201ENSMUST00000157785 135 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Gm23223-201ENSMUST00000158119 127 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Mir5112-201ENSMUST00000174897 60 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Gm43521-201ENSMUST00000197838 255 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Gm18748-201ENSMUST00000198507 622 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms