Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm9818-201ENSMUST00000050900 255 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15312-201ENSMUST00000118827 271 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm14901-201ENSMUST00000119001 283 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm16445-201ENSMUST00000120399 714 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm5646-201ENSMUST00000120568 714 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15309-201ENSMUST00000121644 240 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm24061-201ENSMUST00000157489 120 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm4761-201ENSMUST00000178086 582 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm29550-201ENSMUST00000185543 285 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm38395-201ENSMUST00000199904 830 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm45530-201ENSMUST00000211658 225 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm24928-201ENSMUST00000083399 107 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm25897-201ENSMUST00000083709 107 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm22829-201ENSMUST00000083771 106 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.42□□□□□ -1.86
Ccdc28bQ8CEG5 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm3940-201ENSMUST00000105087 432 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm14899-201ENSMUST00000118673 548 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm12607-201ENSMUST00000120724 493 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm23429-201ENSMUST00000122486 149 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm22345-201ENSMUST00000122644 107 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm24289-201ENSMUST00000157629 135 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm17117-201ENSMUST00000163665 299 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm20612-201ENSMUST00000176318 236 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm27861-201ENSMUST00000183920 214 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm18448-201ENSMUST00000186286 599 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm42832-201ENSMUST00000196361 745 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm31230-201ENSMUST00000199725 785 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm34091-201ENSMUST00000200875 604 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm25630-201ENSMUST00000084000 162 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm14797-201ENSMUST00000119378 1480 ntBASIC3.41□□□□□ -1.86
Ccdc28bQ8CEG5 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.4□□□□□ -1.86
Ccdc28bQ8CEG5 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm13567-201ENSMUST00000118026 247 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm15951-201ENSMUST00000118377 400 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm2318-201ENSMUST00000119623 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm2768-201ENSMUST00000121062 250 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm15077-201ENSMUST00000122344 362 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23212-201ENSMUST00000122718 60 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms