Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm23289-201ENSMUST00000175615 108 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm29657-201ENSMUST00000189807 342 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm44277-201ENSMUST00000205128 649 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm13588-201ENSMUST00000120026 135 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm22116-201ENSMUST00000158791 141 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm27535-201ENSMUST00000183814 157 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm21489-201ENSMUST00000189668 818 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm32175-201ENSMUST00000193641 346 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Trbv27-201ENSMUST00000193711 277 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm45678-201ENSMUST00000210509 295 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Olfr790-204ENSMUST00000218901 1070 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm22683-201ENSMUST00000082854 137 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm25807-201ENSMUST00000122783 305 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm24638-201ENSMUST00000179807 132 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.07□□□□□ -2.08
Col6a6Q8C6K9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm23980-201ENSMUST00000157135 158 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm9892-201ENSMUST00000182415 992 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Mir410-201ENSMUST00000083563 81 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm23063-201ENSMUST00000102350 93 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm12213-201ENSMUST00000119924 353 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm12042-201ENSMUST00000120479 301 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm16328-201ENSMUST00000126985 196 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm23600-201ENSMUST00000157260 71 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm25836-201ENSMUST00000158918 123 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm8249-201ENSMUST00000219225 465 ntBASIC2.06□□□□□ -2.08
Col6a6Q8C6K9 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm23885-201ENSMUST00000122682 294 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm19257-201ENSMUST00000186121 183 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm13314-201ENSMUST00000118742 335 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm24885-201ENSMUST00000158783 270 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm24177-201ENSMUST00000158927 131 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm9251-201ENSMUST00000197202 628 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Gm44181-201ENSMUST00000203106 483 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.05□□□□□ -2.08
Col6a6Q8C6K9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Gm28399-201ENSMUST00000186221 318 ntBASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Gm28572-201ENSMUST00000187444 318 ntBASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Gm29524-201ENSMUST00000190819 699 ntBASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Gm37732-201ENSMUST00000194377 316 ntBASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 AC132121.1-201ENSMUST00000220774 332 ntBASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 AC126554.4-201ENSMUST00000221055 409 ntBASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 AC174082.1-201ENSMUST00000221106 307 ntBASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a6Q8C6K9 Gm42537-201ENSMUST00000198260 2574 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms