Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm12739-201ENSMUST00000119769 382 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Gm25048-201ENSMUST00000158598 91 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Gm23864-201ENSMUST00000177607 107 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Gm22584-201ENSMUST00000177935 92 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Gm24863-201ENSMUST00000179499 107 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Gm19202-201ENSMUST00000198096 808 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Gm35876-201ENSMUST00000205044 459 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp40Q8BWR4 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Gm22169-201ENSMUST00000083229 107 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp40Q8BWR4 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm24338-201ENSMUST00000104205 127 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm11970-201ENSMUST00000116105 320 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm7164-201ENSMUST00000117503 450 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm14362-201ENSMUST00000121679 273 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm15254-201ENSMUST00000149567 273 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm26276-201ENSMUST00000157099 109 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm28069-201ENSMUST00000189926 214 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm20923-201ENSMUST00000190009 319 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm28951-201ENSMUST00000190742 313 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm34779-201ENSMUST00000210036 263 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm8288-201ENSMUST00000223406 593 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 AC154257.2-201ENSMUST00000224166 340 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm22265-201ENSMUST00000082947 116 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC5.53□□□□□ -1.52
Usp40Q8BWR4 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 AC134596.1-201ENSMUST00000222016 1922 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm25765-201ENSMUST00000104100 132 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm25833-201ENSMUST00000104137 133 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Snord72-201ENSMUST00000104549 81 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm12564-201ENSMUST00000119860 321 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm2768-201ENSMUST00000121062 250 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm14761-201ENSMUST00000121363 262 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm23792-201ENSMUST00000122557 93 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm24897-201ENSMUST00000179033 107 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm45588-201ENSMUST00000211213 630 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 AC166343.1-201ENSMUST00000213261 577 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 AL669916.3-201ENSMUST00000213855 94 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 AL669916.6-201ENSMUST00000214610 94 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 AL669916.4-201ENSMUST00000215976 94 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 AL669916.1-201ENSMUST00000217640 94 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm7034-201ENSMUST00000218638 645 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm26225-201ENSMUST00000082508 135 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Gm23503-201ENSMUST00000083903 107 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Olfr895-201ENSMUST00000093864 951 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 AC102369.2-201ENSMUST00000219725 1679 ntBASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Usp40Q8BWR4 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms