Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm22778-201ENSMUST00000104090 128 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm11813-201ENSMUST00000118586 291 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm15195-201ENSMUST00000118775 263 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm15267-201ENSMUST00000120888 464 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm15075-201ENSMUST00000122187 477 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm23214-201ENSMUST00000122716 157 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm25883-201ENSMUST00000157781 271 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm24546-201ENSMUST00000158652 102 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm27896-201ENSMUST00000175162 317 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm25361-201ENSMUST00000179358 76 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm22621-201ENSMUST00000179678 74 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Gm44063-201ENSMUST00000203307 376 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.31□□□□□ -1.56
Trim56Q80VI1 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim56Q80VI1 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm6062-201ENSMUST00000120462 631 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm14578-201ENSMUST00000122166 391 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm26256-201ENSMUST00000122499 186 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm22383-201ENSMUST00000158188 327 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm5258-201ENSMUST00000165437 327 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm18854-201ENSMUST00000211196 329 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm29884-201ENSMUST00000218403 453 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm46190-201ENSMUST00000219650 427 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm23406-201ENSMUST00000082537 122 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.3□□□□□ -1.56
Trim56Q80VI1 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.3□□□□□ -1.56
Trim56Q80VI1 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Mir147-201ENSMUST00000102354 79 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm14628-201ENSMUST00000117508 635 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm13650-201ENSMUST00000117729 433 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm14926-201ENSMUST00000120650 508 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm25808-201ENSMUST00000122784 284 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm24060-201ENSMUST00000157494 95 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm23964-201ENSMUST00000157966 107 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm22536-201ENSMUST00000158171 134 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Mir5624-201ENSMUST00000176635 61 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm21726-201ENSMUST00000179654 392 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm9722-201ENSMUST00000194568 802 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm43914-201ENSMUST00000203592 594 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms