Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
Rnf220Q6PDX6 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.28□□□□□ -1.73
Rnf220Q6PDX6 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm22273-201ENSMUST00000104040 132 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm13664-201ENSMUST00000117304 345 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm13046-201ENSMUST00000117391 501 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm13488-201ENSMUST00000120419 179 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm14736-201ENSMUST00000121470 336 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm16303-201ENSMUST00000161498 390 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm16545-201ENSMUST00000161968 463 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Mir3080-201ENSMUST00000175010 79 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm28399-201ENSMUST00000186221 318 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm28572-201ENSMUST00000187444 318 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm10292-202ENSMUST00000193165 585 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm20056-201ENSMUST00000194813 519 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm45032-201ENSMUST00000205375 520 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm44521-201ENSMUST00000206469 217 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 AC102369.1-201ENSMUST00000218415 373 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf220Q6PDX6 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm22831-201ENSMUST00000102473 109 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm24230-201ENSMUST00000104313 129 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm14355-201ENSMUST00000117352 264 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm15926-201ENSMUST00000120492 550 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm14875-201ENSMUST00000120881 319 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm13132-201ENSMUST00000121194 472 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm22106-201ENSMUST00000122544 127 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm14333-201ENSMUST00000130484 264 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm22491-201ENSMUST00000157190 102 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm22940-201ENSMUST00000158560 155 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm20401-201ENSMUST00000173717 212 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm20543-201ENSMUST00000174200 726 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Mir5129-201ENSMUST00000174938 78 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm29159-201ENSMUST00000187969 379 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm32340-201ENSMUST00000192883 259 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm37523-201ENSMUST00000194901 412 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm43828-201ENSMUST00000196890 639 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm2011-203ENSMUST00000203750 435 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm18904-201ENSMUST00000218756 329 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm23627-201ENSMUST00000082459 107 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm22502-201ENSMUST00000082488 107 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm22977-201ENSMUST00000082615 107 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm24149-201ENSMUST00000082757 107 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm26263-201ENSMUST00000083281 164 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Gm25187-201ENSMUST00000083906 133 ntBASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rnf220Q6PDX6 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rnf220Q6PDX6 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Rnf220Q6PDX6 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.25□□□□□ -1.73
Rnf220Q6PDX6 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Rnf220Q6PDX6 Gm14987-201ENSMUST00000117820 676 ntBASIC4.25□□□□□ -1.73
Rnf220Q6PDX6 Gm14521-201ENSMUST00000119545 350 ntBASIC4.25□□□□□ -1.73
Rnf220Q6PDX6 Gm15745-201ENSMUST00000119807 115 ntBASIC4.25□□□□□ -1.73
Rnf220Q6PDX6 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.25□□□□□ -1.73
Rnf220Q6PDX6 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms