Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5□□□□□ -1.61
Trim28Q62318 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5□□□□□ -1.61
Trim28Q62318 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC5□□□□□ -1.61
Trim28Q62318 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5□□□□□ -1.61
Trim28Q62318 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Trim28Q62318 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC5□□□□□ -1.61
Trim28Q62318 AC152946.2-201ENSMUST00000219071 337 ntBASIC5□□□□□ -1.61
Trim28Q62318 AC160999.1-201ENSMUST00000225675 810 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm24043-201ENSMUST00000083108 116 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm23815-201ENSMUST00000083231 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Mir28a-201ENSMUST00000083560 86 ntBASIC5□□□□□ -1.61
Trim28Q62318 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim28Q62318 Gm23520-201ENSMUST00000093736 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim28Q62318 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim28Q62318 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim28Q62318 Gm20342-201ENSMUST00000185480 9720 ntBASIC5□□□□□ -1.61
Trim28Q62318 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim28Q62318 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim28Q62318 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim28Q62318 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim28Q62318 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim28Q62318 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim28Q62318 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim28Q62318 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim28Q62318 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Trim28Q62318 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trim28Q62318 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trim28Q62318 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Gm15231-201ENSMUST00000119174 447 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Gm12515-201ENSMUST00000120116 361 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Gm13409-201ENSMUST00000122072 546 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Gm26255-201ENSMUST00000122492 103 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC4.99□□□□□ -1.61
Trim28Q62318 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Spin2g-201ENSMUST00000178425 687 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.99□□□□□ -1.61
Trim28Q62318 Gm27342-201ENSMUST00000183530 109 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.99□□□□□ -1.61
Trim28Q62318 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trim28Q62318 Gm43624-201ENSMUST00000197368 180 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Gm7117-201ENSMUST00000071515 387 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Gm23736-201ENSMUST00000082553 75 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.99□□□□□ -1.61
Trim28Q62318 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim28Q62318 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC4.99□□□□□ -1.61
Trim28Q62318 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim28Q62318 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Trim28Q62318 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim28Q62318 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim28Q62318 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim28Q62318 Gm15026-201ENSMUST00000119219 458 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm11363-201ENSMUST00000121672 548 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm7855-201ENSMUST00000137737 687 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm24910-201ENSMUST00000157289 272 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm24737-201ENSMUST00000158861 100 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm24976-201ENSMUST00000158972 135 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm17054-201ENSMUST00000169811 259 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim28Q62318 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.98□□□□□ -1.61
Trim28Q62318 Gm19932-201ENSMUST00000177033 313 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.98□□□□□ -1.61
Trim28Q62318 Gm38050-201ENSMUST00000191904 238 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm43976-201ENSMUST00000203637 235 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm44687-201ENSMUST00000204975 235 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.98□□□□□ -1.61
Trim28Q62318 Gm18194-201ENSMUST00000210455 481 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim28Q62318 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim28Q62318 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim28Q62318 Gm7204-201ENSMUST00000062591 600 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim28Q62318 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim28Q62318 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim28Q62318 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim28Q62318 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.98□□□□□ -1.61
Trim28Q62318 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim28Q62318 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim28Q62318 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trim28Q62318 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim28Q62318 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim28Q62318 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim28Q62318 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms