Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm4017-201ENSMUST00000084813 338 ntBASIC3.38□□□□□ -1.87
Six3Q62233 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Six3Q62233 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Six3Q62233 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Six3Q62233 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Six3Q62233 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Six3Q62233 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Six3Q62233 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Six3Q62233 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.38□□□□□ -1.87
Six3Q62233 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.38□□□□□ -1.87
Six3Q62233 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.38□□□□□ -1.87
Six3Q62233 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Six3Q62233 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Six3Q62233 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Six3Q62233 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Six3Q62233 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Six3Q62233 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Six3Q62233 Gm14943-201ENSMUST00000118056 546 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm13627-201ENSMUST00000119700 706 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm12335-201ENSMUST00000119738 327 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm14768-201ENSMUST00000122126 678 ntBASIC3.37□□□□□ -1.87
Six3Q62233 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.37□□□□□ -1.87
Six3Q62233 Gm23592-201ENSMUST00000157859 117 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm23032-201ENSMUST00000157995 107 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm23773-201ENSMUST00000158985 296 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm28030-201ENSMUST00000184987 138 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm29600-201ENSMUST00000188687 377 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm28956-201ENSMUST00000189047 427 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Trbv8-201ENSMUST00000194020 285 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm37495-201ENSMUST00000194590 264 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm43224-201ENSMUST00000201567 898 ntBASIC3.37□□□□□ -1.87
Six3Q62233 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Six3Q62233 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.37□□□□□ -1.87
Six3Q62233 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.37□□□□□ -1.87
Six3Q62233 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm25582-201ENSMUST00000083412 110 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Six3Q62233 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Six3Q62233 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Six3Q62233 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Six3Q62233 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.37□□□□□ -1.87
Six3Q62233 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six3Q62233 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Six3Q62233 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Six3Q62233 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Six3Q62233 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six3Q62233 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six3Q62233 Gm13454-201ENSMUST00000118166 483 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm7363-201ENSMUST00000119883 399 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm5646-201ENSMUST00000120568 714 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm14253-201ENSMUST00000122112 639 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm5958-201ENSMUST00000147698 297 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm22840-201ENSMUST00000158444 136 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm23775-201ENSMUST00000158991 249 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.36□□□□□ -1.87
Six3Q62233 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.36□□□□□ -1.87
Six3Q62233 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Six3Q62233 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm28390-201ENSMUST00000185212 700 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.36□□□□□ -1.87
Six3Q62233 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.36□□□□□ -1.87
Six3Q62233 Gm37438-201ENSMUST00000192813 393 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Six3Q62233 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.36□□□□□ -1.87
Six3Q62233 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.36□□□□□ -1.87
Six3Q62233 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.36□□□□□ -1.87
Six3Q62233 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm4036-201ENSMUST00000220842 626 ntBASIC3.36□□□□□ -1.87
Six3Q62233 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.36□□□□□ -1.87
Six3Q62233 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Six3Q62233 Gm24610-201ENSMUST00000083270 109 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Mir193a-201ENSMUST00000083461 66 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.36□□□□□ -1.87
Six3Q62233 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Six3Q62233 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six3Q62233 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six3Q62233 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six3Q62233 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.36□□□□□ -1.87
Six3Q62233 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Six3Q62233 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six3Q62233 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.36□□□□□ -1.87
Six3Q62233 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six3Q62233 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Six3Q62233 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Six3Q62233 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Six3Q62233 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Six3Q62233 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms