Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Snord93-201ENSMUST00000175580 71 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Trbv6-201ENSMUST00000193743 276 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm37836-201ENSMUST00000195875 175 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm9632-201ENSMUST00000195934 643 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm43044-201ENSMUST00000198091 379 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm45400-201ENSMUST00000211603 653 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 AC153852.1-201ENSMUST00000217881 567 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 AC124489.2-201ENSMUST00000223930 589 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Ap3m1-208ENSMUST00000224016 764 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 AC107757.3-201ENSMUST00000226312 535 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm24313-201ENSMUST00000082561 133 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm12383-201ENSMUST00000120628 760 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm6591-201ENSMUST00000121063 434 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm23887-201ENSMUST00000122683 172 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm24382-201ENSMUST00000122698 107 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm23600-201ENSMUST00000157260 71 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Mir6402-201ENSMUST00000183406 80 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm27786-201ENSMUST00000184337 70 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm30280-201ENSMUST00000192214 262 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm37791-201ENSMUST00000195081 286 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm3724-201ENSMUST00000197957 349 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm43214-201ENSMUST00000199242 352 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm42896-201ENSMUST00000201249 1113 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm43124-201ENSMUST00000201878 278 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm45034-201ENSMUST00000206831 482 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm44849-201ENSMUST00000207595 484 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm45553-201ENSMUST00000209929 507 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 AC153506.2-201ENSMUST00000218051 257 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm8231-201ENSMUST00000221617 783 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 AC134254.5-201ENSMUST00000223436 400 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 AC154626.1-201ENSMUST00000226070 311 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 AC132112.1-201ENSMUST00000226354 505 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 AC144819.1-201ENSMUST00000227015 620 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Mir337-201ENSMUST00000083592 97 ntBASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Trav3-1Q5R1I8 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm43300-201ENSMUST00000198540 2043 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm14786-201ENSMUST00000117127 944 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm13733-201ENSMUST00000117290 535 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm12235-201ENSMUST00000118596 170 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm11935-201ENSMUST00000118608 399 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm12006-201ENSMUST00000120786 403 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm26280-201ENSMUST00000157096 101 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm20450-201ENSMUST00000173652 147 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm20401-201ENSMUST00000173717 212 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm5224-201ENSMUST00000183060 350 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm17946-201ENSMUST00000186856 538 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm18800-202ENSMUST00000188688 1105 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm37239-201ENSMUST00000193510 141 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm45209-201ENSMUST00000207122 353 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Gm45316-201ENSMUST00000210128 162 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms