Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm43489-201ENSMUST00000196810 993 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Gm43930-201ENSMUST00000203868 845 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Gm19039-201ENSMUST00000204363 575 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Gm17838-201ENSMUST00000205872 876 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Gm44718-201ENSMUST00000206886 359 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 AC132104.1-201ENSMUST00000213615 260 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Gm24611-201ENSMUST00000083272 107 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Gm22971-201ENSMUST00000083305 97 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Gm23264-201ENSMUST00000083372 107 ntBASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm25466-201ENSMUST00000103995 132 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm15282-201ENSMUST00000117707 300 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm15147-201ENSMUST00000122263 483 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm23116-201ENSMUST00000158481 67 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm17075-201ENSMUST00000171924 670 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm24082-201ENSMUST00000175175 83 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm29576-201ENSMUST00000188020 678 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm28354-201ENSMUST00000190904 678 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm7142-201ENSMUST00000194232 586 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm44060-201ENSMUST00000204440 410 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm6215-201ENSMUST00000119297 1386 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.2□□□□□ -2.06
Trav8d-1Q5R1H8 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm11356-201ENSMUST00000118974 192 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm11582-201ENSMUST00000121041 236 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm43478-201ENSMUST00000200381 292 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm18043-201ENSMUST00000216741 739 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Gm18892-201ENSMUST00000217628 881 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm24715-201ENSMUST00000102377 95 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Snora36b-201ENSMUST00000104383 132 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm25539-201ENSMUST00000116886 122 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm13329-201ENSMUST00000117063 265 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm12268-201ENSMUST00000118398 442 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm5754-201ENSMUST00000118774 892 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm14159-201ENSMUST00000119832 451 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm16533-201ENSMUST00000140035 228 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm9785-202ENSMUST00000144563 593 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm23467-201ENSMUST00000157127 159 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm5967-201ENSMUST00000172723 494 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Gm22853-201ENSMUST00000174974 131 ntBASIC2.18□□□□□ -2.06
Trav8d-1Q5R1H8 Mir3965-201ENSMUST00000175570 69 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms