Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm3816-201ENSMUST00000209803 433 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 AC164561.1-201ENSMUST00000220414 115 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 AC123705.3-201ENSMUST00000223531 2069 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm37890-201ENSMUST00000195610 3992 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm25538-201ENSMUST00000101943 107 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Mir541-201ENSMUST00000102097 90 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm26075-201ENSMUST00000104062 121 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm25419-201ENSMUST00000104215 191 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm7312-201ENSMUST00000118798 469 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm14877-201ENSMUST00000119803 478 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm14732-201ENSMUST00000121372 545 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm25071-201ENSMUST00000175232 70 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm29140-201ENSMUST00000190187 476 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 AC154994.1-201ENSMUST00000217395 302 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 AC154282.1-201ENSMUST00000223154 265 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 AC241593.2-201ENSMUST00000225099 510 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Snora30-201ENSMUST00000083325 130 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm37789-201ENSMUST00000192862 2889 ntBASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim41Q5NCC3 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim41Q5NCC3 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim41Q5NCC3 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trim41Q5NCC3 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm37779-201ENSMUST00000194221 3380 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC8.83□□□□□ -1
Trim41Q5NCC3 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim41Q5NCC3 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim41Q5NCC3 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm11486-201ENSMUST00000107322 478 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm11822-201ENSMUST00000119177 415 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm22116-201ENSMUST00000158791 141 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm23151-201ENSMUST00000178061 107 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm25360-201ENSMUST00000178786 191 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm25473-201ENSMUST00000180191 107 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm27421-201ENSMUST00000184729 167 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Stk-ps2-204ENSMUST00000187808 616 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 AC126267.1-201ENSMUST00000214282 284 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm5750-201ENSMUST00000218711 801 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Gm45815-201ENSMUST00000220241 146 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 AC154576.1-201ENSMUST00000225864 563 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 AC151971.5-201ENSMUST00000214422 3254 ntBASIC8.83□□□□□ -1
Trim41Q5NCC3 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC8.83□□□□□ -1
Trim41Q5NCC3 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim41Q5NCC3 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Trim41Q5NCC3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim41Q5NCC3 AC122355.1-201ENSMUST00000228155 4184 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Trim41Q5NCC3 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim41Q5NCC3 Gm15783-201ENSMUST00000117521 633 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 Gm7840-201ENSMUST00000122086 533 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 n-R5s61-201ENSMUST00000122711 118 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC8.82□□□□□ -1
Trim41Q5NCC3 Gm22804-201ENSMUST00000158052 101 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 Gm22011-201ENSMUST00000158790 123 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 Mir1957b-201ENSMUST00000184608 123 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 Gm9696-202ENSMUST00000191541 830 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 Gm45651-201ENSMUST00000210857 335 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 AC170999.2-201ENSMUST00000226223 264 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim41Q5NCC3 Gm10723-201ENSMUST00000195366 6918 ntBASIC8.82□□□□□ -1
Trim41Q5NCC3 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim41Q5NCC3 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim41Q5NCC3 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim41Q5NCC3 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm26140-201ENSMUST00000103807 110 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm23014-201ENSMUST00000104144 130 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm15603-201ENSMUST00000119252 492 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm12852-201ENSMUST00000119478 719 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm27528-201ENSMUST00000183544 205 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC8.81□□□□□ -1
Trim41Q5NCC3 AL645522.1-201ENSMUST00000197692 104 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm45296-201ENSMUST00000209625 205 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC8.81□□□□□ -1
Trim41Q5NCC3 AC158622.1-201ENSMUST00000217107 230 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim41Q5NCC3 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC8.81□□□□□ -1
Trim41Q5NCC3 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim41Q5NCC3 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 124.7 ms