Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Ccdc88bQ4QRL3 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 Gm13555-201ENSMUST00000121668 319 ntBASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 Gm26004-201ENSMUST00000158804 116 ntBASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 Gm7214-201ENSMUST00000222428 272 ntBASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc88bQ4QRL3 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Gm26187-201ENSMUST00000157693 101 ntBASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Gm21006-201ENSMUST00000196930 667 ntBASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Gm9818-201ENSMUST00000050900 255 ntBASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc88bQ4QRL3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Mir758-201ENSMUST00000103260 81 ntBASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Gm15844-201ENSMUST00000118016 576 ntBASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Gm22084-201ENSMUST00000157585 105 ntBASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Gm22361-201ENSMUST00000158435 176 ntBASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Gm17183-201ENSMUST00000171170 493 ntBASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Gm21959-201ENSMUST00000178439 452 ntBASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Gm28627-201ENSMUST00000186141 453 ntBASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Gm37837-201ENSMUST00000191743 604 ntBASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc88bQ4QRL3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 Gm6373-201ENSMUST00000121026 360 ntBASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 Gm18953-201ENSMUST00000175694 300 ntBASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.93□□□□□ -1.78
Ccdc88bQ4QRL3 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Gm27991-201ENSMUST00000184804 137 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Gm45380-201ENSMUST00000210465 315 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Gm23960-201ENSMUST00000157206 131 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Mir142-201ENSMUST00000198092 64 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Gm43295-201ENSMUST00000201439 412 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Gm18043-201ENSMUST00000216741 739 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Gm18557-201ENSMUST00000218710 433 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc88bQ4QRL3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm25068-201ENSMUST00000103895 110 ntBASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm21489-201ENSMUST00000189668 818 ntBASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm42526-201ENSMUST00000198956 393 ntBASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm44903-201ENSMUST00000206840 130 ntBASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm45105-201ENSMUST00000207824 397 ntBASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm45296-201ENSMUST00000209625 205 ntBASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm45395-201ENSMUST00000209891 559 ntBASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Gm25628-201ENSMUST00000084002 105 ntBASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc88bQ4QRL3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Ccdc88bQ4QRL3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Ccdc88bQ4QRL3 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.9□□□□□ -1.79
Ccdc88bQ4QRL3 Gm16533-201ENSMUST00000140035 228 ntBASIC3.9□□□□□ -1.79
Ccdc88bQ4QRL3 Mir669n-201ENSMUST00000158636 54 ntBASIC3.9□□□□□ -1.79
Ccdc88bQ4QRL3 Gm45772-201ENSMUST00000212961 240 ntBASIC3.9□□□□□ -1.79
Ccdc88bQ4QRL3 Gm17890-201ENSMUST00000221419 757 ntBASIC3.9□□□□□ -1.79
Ccdc88bQ4QRL3 Gm6030-201ENSMUST00000078768 402 ntBASIC3.9□□□□□ -1.79
Ccdc88bQ4QRL3 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.9□□□□□ -1.79
Ccdc88bQ4QRL3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Gm25094-201ENSMUST00000103992 131 ntBASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Gm12941-201ENSMUST00000117934 220 ntBASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Gm12042-201ENSMUST00000120479 301 ntBASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms