Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm25699-201ENSMUST00000082896 167 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm14880-201ENSMUST00000117581 292 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm23213-201ENSMUST00000122715 313 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm23325-201ENSMUST00000157422 129 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm25490-201ENSMUST00000158734 130 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm25198-201ENSMUST00000178574 110 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm25944-201ENSMUST00000178758 94 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm25360-201ENSMUST00000178786 191 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm21893-201ENSMUST00000179119 397 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm18660-201ENSMUST00000199542 629 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm44857-201ENSMUST00000208331 196 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Upf3bQ3ULL6 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Mir499-201ENSMUST00000102357 79 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm9119-201ENSMUST00000118866 495 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm11446-201ENSMUST00000121319 866 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm29524-201ENSMUST00000190819 699 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm1833-201ENSMUST00000191608 682 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm43393-201ENSMUST00000200147 194 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm44076-201ENSMUST00000203072 520 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm43930-201ENSMUST00000203868 845 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm19253-201ENSMUST00000204279 307 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm44266-201ENSMUST00000205235 500 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm23615-201ENSMUST00000082602 65 ntBASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Upf3bQ3ULL6 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm15399-201ENSMUST00000118055 724 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm8260-201ENSMUST00000119230 353 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm11881-201ENSMUST00000119408 572 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm15488-201ENSMUST00000121682 670 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm25807-201ENSMUST00000122783 305 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm22561-201ENSMUST00000157331 84 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm24002-201ENSMUST00000158456 104 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm18415-201ENSMUST00000177464 647 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm28358-202ENSMUST00000189292 223 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm44849-201ENSMUST00000207595 484 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Gm46194-201ENSMUST00000218136 320 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Upf3bQ3ULL6 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm11367-201ENSMUST00000117802 120 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm11253-201ENSMUST00000118486 201 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm12803-201ENSMUST00000118907 821 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm14008-201ENSMUST00000120483 274 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm14578-201ENSMUST00000122166 391 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm14804-201ENSMUST00000122322 508 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm26027-201ENSMUST00000122725 268 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm23205-201ENSMUST00000158671 103 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm26585-201ENSMUST00000180890 630 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm44348-201ENSMUST00000200165 122 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms