Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm26437-201ENSMUST00000082595 105 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Mir804-201ENSMUST00000103251 95 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm25097-201ENSMUST00000104042 145 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm22543-201ENSMUST00000104347 94 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm12071-201ENSMUST00000121968 469 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm15116-201ENSMUST00000122248 663 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm15733-201ENSMUST00000132957 242 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm2092-201ENSMUST00000178887 639 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm2759-201ENSMUST00000179938 639 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm19620-201ENSMUST00000195972 434 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm43967-201ENSMUST00000203787 301 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 AF357341-201ENSMUST00000083088 75 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Gm24611-201ENSMUST00000083272 107 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm11881-201ENSMUST00000119408 572 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm12515-201ENSMUST00000120116 361 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm16100-201ENSMUST00000120489 231 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm11471-201ENSMUST00000121824 198 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm23792-201ENSMUST00000122557 93 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm22693-201ENSMUST00000175049 442 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm22392-201ENSMUST00000177971 107 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm27233-201ENSMUST00000184030 307 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm45778-201ENSMUST00000211959 153 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm5655-201ENSMUST00000221078 901 ntBASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.22□□□□□ -1.89
Upf3aQ3ULJ3 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.21□□□□□ -1.89
Upf3aQ3ULJ3 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm14554-201ENSMUST00000119548 661 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm12723-201ENSMUST00000120700 451 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm15157-201ENSMUST00000121852 702 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm16274-201ENSMUST00000139251 592 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm23167-201ENSMUST00000157155 103 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm24691-201ENSMUST00000157762 140 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm3025-201ENSMUST00000163454 489 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm17063-201ENSMUST00000168135 456 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm2878-201ENSMUST00000170173 486 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm24111-201ENSMUST00000175491 97 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm28002-201ENSMUST00000184832 100 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm27505-201ENSMUST00000185071 110 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm28788-201ENSMUST00000189717 375 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm29558-201ENSMUST00000190134 375 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms