Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm20612-201ENSMUST00000176318 236 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm27308-201ENSMUST00000184807 233 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm28155-201ENSMUST00000191066 151 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm44084-201ENSMUST00000203947 409 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm11488-201ENSMUST00000117277 863 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm14943-201ENSMUST00000118056 546 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm13087-201ENSMUST00000118298 256 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm24289-201ENSMUST00000157629 135 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm23317-201ENSMUST00000157999 129 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm22532-201ENSMUST00000158822 140 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Mir6393-201ENSMUST00000183709 94 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm44927-201ENSMUST00000207573 716 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm8681-201ENSMUST00000219115 618 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.22□□□□□ -1.89
Trafd1Q3UDK1 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
Trafd1Q3UDK1 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Trafd1Q3UDK1 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm6913-201ENSMUST00000100019 348 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm26474-201ENSMUST00000116762 122 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm6429-201ENSMUST00000117144 475 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm14681-201ENSMUST00000118047 411 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm14119-201ENSMUST00000119511 235 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm25102-201ENSMUST00000122479 112 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm24936-201ENSMUST00000122598 247 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm22208-201ENSMUST00000122658 110 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm26045-201ENSMUST00000157862 97 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm15946-201ENSMUST00000160654 423 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm8161-201ENSMUST00000168739 481 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm9613-201ENSMUST00000171662 196 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm27538-201ENSMUST00000185065 294 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm28956-201ENSMUST00000189047 427 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm18692-201ENSMUST00000193047 511 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm43415-201ENSMUST00000201934 750 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm9712-201ENSMUST00000210842 311 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm9765-201ENSMUST00000043170 321 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm23448-201ENSMUST00000083151 104 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms