Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Gm22304-201ENSMUST00000082688 129 ntBASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Gm22265-201ENSMUST00000082947 116 ntBASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ssbp4Q3U4B1 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm14125-201ENSMUST00000113442 680 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm15613-201ENSMUST00000118396 326 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm13574-201ENSMUST00000120482 394 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm15014-201ENSMUST00000120742 258 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm25667-201ENSMUST00000157701 275 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm26045-201ENSMUST00000157862 97 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm22841-201ENSMUST00000158443 62 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm27539-201ENSMUST00000184971 224 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm28343-201ENSMUST00000185386 112 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm18356-201ENSMUST00000185677 623 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm28474-201ENSMUST00000188501 315 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm18900-201ENSMUST00000193218 584 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm43708-201ENSMUST00000198857 961 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm45553-201ENSMUST00000209929 507 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm18225-201ENSMUST00000216708 742 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.25□□□□□ -1.89
Ssbp4Q3U4B1 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm23987-201ENSMUST00000117039 129 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm15783-201ENSMUST00000117521 633 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm15443-201ENSMUST00000118947 820 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm12891-201ENSMUST00000119358 240 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm11600-201ENSMUST00000119592 240 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm14903-201ENSMUST00000122435 537 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm22840-201ENSMUST00000158444 136 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm24550-201ENSMUST00000158648 279 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm26460-201ENSMUST00000175061 126 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm43232-201ENSMUST00000201346 364 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm44371-201ENSMUST00000204148 467 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm18644-201ENSMUST00000211458 815 ntBASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.24□□□□□ -1.89
Ssbp4Q3U4B1 Gm18120-201ENSMUST00000220079 511 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms