Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Col28a1Q2UY11 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Col28a1Q2UY11 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.89□□□□□ -1.79
Col28a1Q2UY11 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col28a1Q2UY11 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Col28a1Q2UY11 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm24788-201ENSMUST00000104283 156 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm11898-201ENSMUST00000117161 385 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm15382-201ENSMUST00000118011 537 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm15399-201ENSMUST00000118055 724 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm14835-201ENSMUST00000119039 315 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm11881-201ENSMUST00000119408 572 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm13482-201ENSMUST00000119842 254 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm14867-201ENSMUST00000120156 866 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm14392-201ENSMUST00000120332 401 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm14919-201ENSMUST00000120839 390 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm14916-201ENSMUST00000121904 204 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm15974-201ENSMUST00000159103 531 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Mir5106-201ENSMUST00000174936 73 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm25451-201ENSMUST00000177832 121 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm23003-201ENSMUST00000179948 107 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm25873-201ENSMUST00000180317 107 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Mir6541-201ENSMUST00000183649 110 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm17989-201ENSMUST00000211543 412 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm46998-201ENSMUST00000221444 330 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.88□□□□□ -1.79
Col28a1Q2UY11 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col28a1Q2UY11 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Snora64-201ENSMUST00000104521 134 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm5757-201ENSMUST00000117494 528 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm24441-201ENSMUST00000157235 281 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm22519-201ENSMUST00000158270 178 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm16101-201ENSMUST00000160695 430 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm8338-201ENSMUST00000163928 363 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm21991-201ENSMUST00000180006 508 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm29064-201ENSMUST00000187014 813 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm20162-201ENSMUST00000193629 871 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm43070-201ENSMUST00000196938 415 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Mir129b-201ENSMUST00000197461 65 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm43114-201ENSMUST00000198298 343 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm44149-201ENSMUST00000204256 226 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm44923-201ENSMUST00000206673 85 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm46996-201ENSMUST00000220924 408 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Ear14-201ENSMUST00000049559 468 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm22265-201ENSMUST00000082947 116 ntBASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.87□□□□□ -1.79
Col28a1Q2UY11 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col28a1Q2UY11 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col28a1Q2UY11 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col28a1Q2UY11 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 167.4 ms