Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Col17a1Q07563 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.83□□□□□ -1.48
Col17a1Q07563 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col17a1Q07563 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col17a1Q07563 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm24683-201ENSMUST00000104840 88 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm11869-201ENSMUST00000118701 329 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm8260-201ENSMUST00000119230 353 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm23121-201ENSMUST00000157653 173 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm25981-201ENSMUST00000157921 295 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm24958-201ENSMUST00000158009 97 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm29550-201ENSMUST00000185543 285 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm29259-201ENSMUST00000186396 694 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm29556-201ENSMUST00000187591 696 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col17a1Q07563 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.83□□□□□ -1.48
Col17a1Q07563 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col17a1Q07563 AC130477.2-201ENSMUST00000228158 274 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col17a1Q07563 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col17a1Q07563 Mir181a-1-201ENSMUST00000083631 87 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col17a1Q07563 Gm42671-201ENSMUST00000198013 1604 ntBASIC5.83□□□□□ -1.48
Col17a1Q07563 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col17a1Q07563 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm14622-201ENSMUST00000117117 468 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm14530-201ENSMUST00000122391 333 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm13368-201ENSMUST00000122443 430 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm24847-201ENSMUST00000158032 108 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm28843-201ENSMUST00000189198 678 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm29546-201ENSMUST00000191171 678 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm43730-201ENSMUST00000199863 372 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm44055-201ENSMUST00000204376 247 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm44399-201ENSMUST00000205043 226 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm44972-201ENSMUST00000206419 406 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col17a1Q07563 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm46234-201ENSMUST00000218702 259 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col17a1Q07563 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Col17a1Q07563 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.82□□□□□ -1.48
Col17a1Q07563 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm43508-201ENSMUST00000197251 3783 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm26273-201ENSMUST00000104180 131 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Snord65-201ENSMUST00000104269 72 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm22072-201ENSMUST00000116850 121 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm14972-201ENSMUST00000121780 364 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm25806-201ENSMUST00000122782 122 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm24438-201ENSMUST00000157893 115 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm22841-201ENSMUST00000158443 62 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm24550-201ENSMUST00000158648 279 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm5929-201ENSMUST00000166883 487 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm22242-201ENSMUST00000175224 118 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm27942-201ENSMUST00000184669 101 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm43979-201ENSMUST00000203179 475 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col17a1Q07563 Olfr512-201ENSMUST00000074730 1056 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm24460-201ENSMUST00000082731 106 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.81□□□□□ -1.48
Col17a1Q07563 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col17a1Q07563 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms