Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NcanP55066 Gm23767-201ENSMUST00000179278 94 ntBASIC3.71□□□□□ -1.82
NcanP55066 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NcanP55066 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NcanP55066 Gm27342-201ENSMUST00000183530 109 ntBASIC3.71□□□□□ -1.82
NcanP55066 Gm27505-201ENSMUST00000185071 110 ntBASIC3.71□□□□□ -1.82
NcanP55066 Gm25820-202ENSMUST00000197479 128 ntBASIC3.71□□□□□ -1.82
NcanP55066 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.71□□□□□ -1.82
NcanP55066 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NcanP55066 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NcanP55066 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NcanP55066 Gm6462-201ENSMUST00000081488 304 ntBASIC3.71□□□□□ -1.82
NcanP55066 Gm25699-201ENSMUST00000082896 167 ntBASIC3.71□□□□□ -1.82
NcanP55066 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.71□□□□□ -1.82
NcanP55066 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NcanP55066 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.71□□□□□ -1.82
NcanP55066 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.71□□□□□ -1.82
NcanP55066 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.71□□□□□ -1.82
NcanP55066 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NcanP55066 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NcanP55066 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NcanP55066 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NcanP55066 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NcanP55066 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NcanP55066 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm26342-201ENSMUST00000104557 129 ntBASIC3.7□□□□□ -1.82
NcanP55066 Mir208b-201ENSMUST00000104735 77 ntBASIC3.7□□□□□ -1.82
NcanP55066 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NcanP55066 Gm13064-201ENSMUST00000119125 557 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm11456-201ENSMUST00000121070 256 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm14577-201ENSMUST00000121134 256 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm15529-201ENSMUST00000121833 994 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm14903-201ENSMUST00000122435 537 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm9785-202ENSMUST00000144563 593 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm23957-201ENSMUST00000157209 90 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm22651-201ENSMUST00000157872 94 ntBASIC3.7□□□□□ -1.82
NcanP55066 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NcanP55066 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.7□□□□□ -1.82
NcanP55066 Mir378a-201ENSMUST00000198300 66 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm44059-201ENSMUST00000204048 351 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm6303-201ENSMUST00000210123 471 ntBASIC3.7□□□□□ -1.82
NcanP55066 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NcanP55066 Gm32300-201ENSMUST00000221735 515 ntBASIC3.7□□□□□ -1.82
NcanP55066 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.7□□□□□ -1.82
NcanP55066 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.7□□□□□ -1.82
NcanP55066 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NcanP55066 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
NcanP55066 Gm23447-201ENSMUST00000082798 163 ntBASIC3.7□□□□□ -1.82
NcanP55066 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.7□□□□□ -1.82
NcanP55066 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NcanP55066 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NcanP55066 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.7□□□□□ -1.82
NcanP55066 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NcanP55066 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NcanP55066 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NcanP55066 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NcanP55066 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.7□□□□□ -1.82
NcanP55066 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NcanP55066 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NcanP55066 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.69□□□□□ -1.82
NcanP55066 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.69□□□□□ -1.82
NcanP55066 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
NcanP55066 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NcanP55066 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 Gm22939-201ENSMUST00000103958 131 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
NcanP55066 Mir1198-201ENSMUST00000116995 121 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm14677-201ENSMUST00000117866 486 ntBASIC3.69□□□□□ -1.82
NcanP55066 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm14586-201ENSMUST00000119571 408 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm14238-201ENSMUST00000120227 323 ntBASIC3.69□□□□□ -1.82
NcanP55066 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm11389-201ENSMUST00000121407 430 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm16412-201ENSMUST00000121602 273 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.69□□□□□ -1.82
NcanP55066 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 Gm10177-202ENSMUST00000161698 207 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NcanP55066 Spanxn4-201ENSMUST00000172433 424 ntBASIC3.69□□□□□ -1.82
NcanP55066 Mir3075-201ENSMUST00000175340 85 ntBASIC3.69□□□□□ -1.82
NcanP55066 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NcanP55066 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 Gm38333-201ENSMUST00000193608 604 ntBASIC3.69□□□□□ -1.82
NcanP55066 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.69□□□□□ -1.82
NcanP55066 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.69□□□□□ -1.82
NcanP55066 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC3.69□□□□□ -1.82
NcanP55066 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.69□□□□□ -1.82
NcanP55066 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.69□□□□□ -1.82
NcanP55066 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.69□□□□□ -1.82
NcanP55066 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NcanP55066 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NcanP55066 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NcanP55066 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NcanP55066 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms