Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox1P53783 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Gm14774-201ENSMUST00000117857 536 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Gm11313-201ENSMUST00000118779 432 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Gm11369-201ENSMUST00000120812 318 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.02□□□□□ -1.61
Sox1P53783 Gm25066-201ENSMUST00000158145 123 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.02□□□□□ -1.61
Sox1P53783 Gm3191-201ENSMUST00000167139 346 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Mir6344-201ENSMUST00000183462 104 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Gm29397-201ENSMUST00000185205 333 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Gm37029-201ENSMUST00000195773 239 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox1P53783 Gm45678-201ENSMUST00000210509 295 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.02□□□□□ -1.61
Sox1P53783 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.02□□□□□ -1.61
Sox1P53783 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.02□□□□□ -1.61
Sox1P53783 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox1P53783 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Sox1P53783 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox1P53783 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Sox1P53783 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox1P53783 Gm24640-201ENSMUST00000116949 126 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm22626-201ENSMUST00000116990 126 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.01□□□□□ -1.61
Sox1P53783 Gm22219-201ENSMUST00000157562 319 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm22536-201ENSMUST00000158171 134 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC5.01□□□□□ -1.61
Sox1P53783 Mir5134-201ENSMUST00000175529 78 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Gm24761-201ENSMUST00000179589 127 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm24488-201ENSMUST00000179934 127 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm25701-201ENSMUST00000179988 127 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm26431-201ENSMUST00000180199 127 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm27883-201ENSMUST00000183941 102 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm27165-201ENSMUST00000183951 232 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Sox1P53783 Gm30280-201ENSMUST00000192214 262 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox1P53783 Gm44485-201ENSMUST00000199569 137 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox1P53783 Gm44720-201ENSMUST00000206076 260 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm18602-201ENSMUST00000209794 851 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.01□□□□□ -1.61
Sox1P53783 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC5.01□□□□□ -1.61
Sox1P53783 Gm46998-201ENSMUST00000221444 330 ntBASIC5.01□□□□□ -1.61
Sox1P53783 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox1P53783 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox1P53783 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.01□□□□□ -1.61
Sox1P53783 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox1P53783 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
Sox1P53783 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox1P53783 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
Sox1P53783 Gm37456-201ENSMUST00000193176 5837 ntBASIC5□□□□□ -1.61
Sox1P53783 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Sox1P53783 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox1P53783 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5□□□□□ -1.61
Sox1P53783 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Sox1P53783 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox1P53783 Gm37588-201ENSMUST00000195024 2496 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm37677-201ENSMUST00000194520 7634 ntBASIC5□□□□□ -1.61
Sox1P53783 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox1P53783 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox1P53783 Gm37764-201ENSMUST00000194664 2150 ntBASIC5□□□□□ -1.61
Sox1P53783 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox1P53783 Gm13664-201ENSMUST00000117304 345 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm11698-201ENSMUST00000117948 455 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm11923-201ENSMUST00000118135 508 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm12156-201ENSMUST00000119188 554 ntBASIC5□□□□□ -1.61
Sox1P53783 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC5□□□□□ -1.61
Sox1P53783 Gm25341-201ENSMUST00000157461 268 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm25386-201ENSMUST00000157814 288 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm22160-201ENSMUST00000158405 328 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm29665-201ENSMUST00000191457 528 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm38076-201ENSMUST00000193889 450 ntBASIC5□□□□□ -1.61
Sox1P53783 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5□□□□□ -1.61
Sox1P53783 Gm44648-201ENSMUST00000208267 329 ntBASIC5□□□□□ -1.61
Sox1P53783 Gm44811-201ENSMUST00000209120 228 ntBASIC5□□□□□ -1.61
Sox1P53783 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5□□□□□ -1.61
Sox1P53783 AC130222.1-201ENSMUST00000221198 256 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms