Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp4P35123 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Usp4P35123 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp4P35123 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Usp4P35123 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Usp4P35123 Gm24125-201ENSMUST00000104105 137 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm26156-201ENSMUST00000116999 123 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm11625-201ENSMUST00000119535 296 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm14821-201ENSMUST00000121975 435 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm25294-201ENSMUST00000122791 104 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.69□□□□□ -1.66
Usp4P35123 Gm26348-201ENSMUST00000157528 240 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm3851-201ENSMUST00000168653 318 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm6214-201ENSMUST00000178845 541 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm29610-201ENSMUST00000187749 453 ntBASIC4.69□□□□□ -1.66
Usp4P35123 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.69□□□□□ -1.66
Usp4P35123 Gm43586-201ENSMUST00000195948 310 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm19418-201ENSMUST00000197436 580 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp4P35123 Gm44543-201ENSMUST00000209136 396 ntBASIC4.69□□□□□ -1.66
Usp4P35123 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp4P35123 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp4P35123 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.69□□□□□ -1.66
Usp4P35123 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Usp4P35123 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Usp4P35123 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.69□□□□□ -1.66
Usp4P35123 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp4P35123 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp4P35123 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp4P35123 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Usp4P35123 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp4P35123 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Usp4P35123 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Usp4P35123 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp4P35123 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Usp4P35123 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Usp4P35123 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm12285-201ENSMUST00000117347 233 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm15195-201ENSMUST00000118775 263 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm13228-201ENSMUST00000118937 634 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm14714-201ENSMUST00000119743 439 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm14852-201ENSMUST00000120065 647 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm5060-201ENSMUST00000120072 599 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm10059-201ENSMUST00000131139 171 ntBASIC4.68□□□□□ -1.66
Usp4P35123 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Usp4P35123 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.68□□□□□ -1.66
Usp4P35123 Gm22791-201ENSMUST00000157232 145 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm26098-201ENSMUST00000157247 288 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm24774-201ENSMUST00000157384 134 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm24689-201ENSMUST00000157760 104 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.68□□□□□ -1.66
Usp4P35123 Gm5731-201ENSMUST00000190969 481 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm37167-201ENSMUST00000194946 396 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm38008-201ENSMUST00000195333 518 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm44011-201ENSMUST00000203336 394 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm44402-201ENSMUST00000203677 238 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm44054-201ENSMUST00000203814 372 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.68□□□□□ -1.66
Usp4P35123 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.68□□□□□ -1.66
Usp4P35123 AC239878.2-201ENSMUST00000224048 464 ntBASIC4.68□□□□□ -1.66
Usp4P35123 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp4P35123 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp4P35123 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp4P35123 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Usp4P35123 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Usp4P35123 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp4P35123 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.68□□□□□ -1.66
Usp4P35123 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
Usp4P35123 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp4P35123 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp4P35123 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp4P35123 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp4P35123 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp4P35123 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.67□□□□□ -1.66
Usp4P35123 Gm12787-201ENSMUST00000119234 396 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Gm15364-201ENSMUST00000119618 585 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Gm15142-201ENSMUST00000121013 856 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp4P35123 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.67□□□□□ -1.66
Usp4P35123 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms