Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sdc1P18828 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sdc1P18828 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Sdc1P18828 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm24281-201ENSMUST00000104234 136 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm26423-201ENSMUST00000104277 128 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm22543-201ENSMUST00000104347 94 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm11913-201ENSMUST00000119094 336 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm15142-201ENSMUST00000121013 856 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm14804-201ENSMUST00000122322 508 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm8840-201ENSMUST00000122454 386 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm25105-201ENSMUST00000122477 130 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm13194-201ENSMUST00000142299 311 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm26277-201ENSMUST00000157097 152 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm23554-201ENSMUST00000157818 110 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm23387-201ENSMUST00000158586 107 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC2.63□□□□□ -1.99
Sdc1P18828 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sdc1P18828 Mir1251-201ENSMUST00000175486 84 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm27033-201ENSMUST00000183226 544 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm27698-201ENSMUST00000184060 249 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm27942-201ENSMUST00000184669 101 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm2950-201ENSMUST00000185530 520 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm5268-201ENSMUST00000189212 940 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Trbv8-201ENSMUST00000194020 285 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm37209-201ENSMUST00000194109 1276 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm18551-201ENSMUST00000195594 642 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm6510-201ENSMUST00000195916 574 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm43039-201ENSMUST00000202883 963 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm44520-201ENSMUST00000205447 802 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Gm45614-201ENSMUST00000209994 721 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Sdc1P18828 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Sdc1P18828 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC2.63□□□□□ -1.99
Sdc1P18828 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm18557-201ENSMUST00000218710 433 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm19540-201ENSMUST00000221843 810 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.63□□□□□ -1.99
Sdc1P18828 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Sdc1P18828 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sdc1P18828 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Sdc1P18828 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Sdc1P18828 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sdc1P18828 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sdc1P18828 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sdc1P18828 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Sdc1P18828 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Sdc1P18828 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Sdc1P18828 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm15018-201ENSMUST00000117090 633 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm14879-201ENSMUST00000117308 507 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm12706-201ENSMUST00000121588 698 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm16274-201ENSMUST00000139251 592 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm25913-201ENSMUST00000157617 135 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm23666-201ENSMUST00000158053 116 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm24213-201ENSMUST00000158255 258 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm17186-201ENSMUST00000171742 456 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Mir5134-201ENSMUST00000175529 78 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm37343-201ENSMUST00000192542 111 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.62□□□□□ -1.99
Sdc1P18828 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Sdc1P18828 Gm43070-201ENSMUST00000196938 415 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.62□□□□□ -1.99
Sdc1P18828 Gm44259-201ENSMUST00000204996 298 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Sdc1P18828 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC2.62□□□□□ -1.99
Sdc1P18828 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Sdc1P18828 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.62□□□□□ -1.99
Sdc1P18828 AC130673.2-201ENSMUST00000228091 797 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Sdc1P18828 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Sdc1P18828 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.62□□□□□ -1.99
Sdc1P18828 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Gm24254-201ENSMUST00000083702 104 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Sdc1P18828 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Sdc1P18828 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Sdc1P18828 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Sdc1P18828 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.62□□□□□ -1.99
Sdc1P18828 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Sdc1P18828 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Sdc1P18828 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms