Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Cdx1P18111 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm8260-201ENSMUST00000119230 353 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm13541-201ENSMUST00000119519 283 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm12873-201ENSMUST00000119988 422 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm11704-201ENSMUST00000120031 214 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC2.77□□□□□ -1.97
Cdx1P18111 Gm22320-201ENSMUST00000157149 312 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm23860-201ENSMUST00000179446 132 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
Cdx1P18111 Gm27392-201ENSMUST00000185041 101 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm29658-201ENSMUST00000185404 230 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm19637-201ENSMUST00000185933 579 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.77□□□□□ -1.97
Cdx1P18111 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Cdx1P18111 Gm44475-201ENSMUST00000204041 424 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.77□□□□□ -1.97
Cdx1P18111 Gm18410-201ENSMUST00000207199 577 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm18116-201ENSMUST00000220920 537 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 AC121898.1-201ENSMUST00000227599 288 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 AC130673.2-201ENSMUST00000228091 797 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Cdx1P18111 Gm24147-201ENSMUST00000082763 144 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm24928-201ENSMUST00000083399 107 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm25897-201ENSMUST00000083709 107 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.77□□□□□ -1.97
Cdx1P18111 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx1P18111 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm11600-201ENSMUST00000119592 240 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Gm12900-201ENSMUST00000120919 573 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Gm25807-201ENSMUST00000122783 305 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx1P18111 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm25026-201ENSMUST00000175017 188 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Cdx1P18111 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx1P18111 Mir7062-201ENSMUST00000185038 66 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm29553-201ENSMUST00000189692 279 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx1P18111 Trbv8-201ENSMUST00000194020 285 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.76□□□□□ -1.97
Cdx1P18111 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm6590-201ENSMUST00000203343 687 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Gm44720-201ENSMUST00000206076 260 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
Cdx1P18111 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC2.76□□□□□ -1.97
Cdx1P18111 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx1P18111 Gm12582-201ENSMUST00000030555 697 ntBASIC2.76□□□□□ -1.97
Cdx1P18111 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx1P18111 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx1P18111 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx1P18111 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Cdx1P18111 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx1P18111 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx1P18111 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC2.75□□□□□ -1.97
Cdx1P18111 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Cdx1P18111 Gm37064-201ENSMUST00000193851 2231 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Gm22658-201ENSMUST00000104196 155 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdx1P18111 Gm12268-201ENSMUST00000118398 442 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Gm11582-201ENSMUST00000121041 236 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.75□□□□□ -1.97
Cdx1P18111 Gm23470-201ENSMUST00000157129 120 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Gm5967-201ENSMUST00000172723 494 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Mir6405-201ENSMUST00000184584 124 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Gm29452-201ENSMUST00000187996 313 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Gm28860-201ENSMUST00000188103 313 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.75□□□□□ -1.97
Cdx1P18111 Gm28314-201ENSMUST00000191276 345 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Cdx1P18111 Gm43043-201ENSMUST00000196579 412 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cdx1P18111 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Cdx1P18111 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Cdx1P18111 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.75□□□□□ -1.97
Cdx1P18111 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Gm18388-201ENSMUST00000222339 557 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 AC158981.3-201ENSMUST00000226844 1024 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.75□□□□□ -1.97
Cdx1P18111 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdx1P18111 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdx1P18111 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms