Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm14119-201ENSMUST00000119511 235 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC5.3□□□□□ -1.56
Msx1P13297 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Gm23233-201ENSMUST00000157301 137 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Gm24537-201ENSMUST00000157950 102 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Gm24005-201ENSMUST00000158459 296 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Gm23197-201ENSMUST00000158809 112 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Gm26318-201ENSMUST00000176507 96 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Mir466b-1-201ENSMUST00000177988 82 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Gm25121-201ENSMUST00000179846 79 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Mir6343-201ENSMUST00000183584 84 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Gm9402-201ENSMUST00000196849 388 ntBASIC5.3□□□□□ -1.56
Msx1P13297 CT485607.2-201ENSMUST00000214650 91 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.3□□□□□ -1.56
Msx1P13297 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.3□□□□□ -1.56
Msx1P13297 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msx1P13297 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Msx1P13297 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msx1P13297 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.3□□□□□ -1.56
Msx1P13297 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Msx1P13297 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msx1P13297 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.29□□□□□ -1.56
Msx1P13297 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Msx1P13297 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Msx1P13297 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.29□□□□□ -1.56
Msx1P13297 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Msx1P13297 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Msx1P13297 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Msx1P13297 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Msx1P13297 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Gm13581-201ENSMUST00000120675 278 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm25103-201ENSMUST00000122671 318 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.29□□□□□ -1.56
Msx1P13297 Mir1963-201ENSMUST00000158594 59 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Gm25534-201ENSMUST00000175365 125 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm22450-201ENSMUST00000179641 107 ntBASIC5.29□□□□□ -1.56
Msx1P13297 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.29□□□□□ -1.56
Msx1P13297 Gm37162-201ENSMUST00000191708 551 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.29□□□□□ -1.56
Msx1P13297 Gm44324-201ENSMUST00000198517 135 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.29□□□□□ -1.56
Msx1P13297 Gm32222-201ENSMUST00000203296 298 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm44539-201ENSMUST00000206010 238 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm7726-201ENSMUST00000206241 231 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm44648-201ENSMUST00000208267 329 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.29□□□□□ -1.56
Msx1P13297 AC124739.2-201ENSMUST00000222201 109 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm26071-201ENSMUST00000083261 107 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm24521-201ENSMUST00000083958 107 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Msx1P13297 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.29□□□□□ -1.56
Msx1P13297 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msx1P13297 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Msx1P13297 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Msx1P13297 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Msx1P13297 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Msx1P13297 Gm23294-201ENSMUST00000104150 164 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm11065-201ENSMUST00000111462 228 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm15120-201ENSMUST00000120602 301 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm14770-201ENSMUST00000122197 312 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.28□□□□□ -1.56
Msx1P13297 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm17187-201ENSMUST00000164622 410 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Mir5103-201ENSMUST00000175111 79 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm22122-201ENSMUST00000175147 200 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Mir669k-201ENSMUST00000177742 127 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm25673-201ENSMUST00000179957 127 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Msx1P13297 Gm27245-201ENSMUST00000184385 376 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Mir6540-201ENSMUST00000184886 108 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm28304-201ENSMUST00000185977 312 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm29256-201ENSMUST00000189094 312 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm28484-201ENSMUST00000190606 312 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.28□□□□□ -1.56
Msx1P13297 Gm37878-201ENSMUST00000192108 387 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm42855-201ENSMUST00000197388 253 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.28□□□□□ -1.56
Msx1P13297 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms