Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC5.23□□□□□ -1.57
RaraP11416 Gm12226-201ENSMUST00000144172 876 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.23□□□□□ -1.57
RaraP11416 Mir3058-201ENSMUST00000175126 91 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm26189-201ENSMUST00000179879 107 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm28017-201ENSMUST00000183434 126 ntBASIC5.23□□□□□ -1.57
RaraP11416 Mir7222-201ENSMUST00000183740 75 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm27521-201ENSMUST00000184022 64 ntBASIC5.23□□□□□ -1.57
RaraP11416 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.23□□□□□ -1.57
RaraP11416 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.23□□□□□ -1.57
RaraP11416 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC5.23□□□□□ -1.57
RaraP11416 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.23□□□□□ -1.57
RaraP11416 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC5.23□□□□□ -1.57
RaraP11416 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC5.23□□□□□ -1.57
RaraP11416 Gm7540-201ENSMUST00000219764 926 ntBASIC5.23□□□□□ -1.57
RaraP11416 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC5.23□□□□□ -1.57
RaraP11416 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RaraP11416 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.23□□□□□ -1.57
RaraP11416 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RaraP11416 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RaraP11416 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RaraP11416 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RaraP11416 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm37642-201ENSMUST00000193166 1735 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm15088-201ENSMUST00000117973 1508 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm15098-201ENSMUST00000119036 1508 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RaraP11416 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.22□□□□□ -1.57
RaraP11416 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RaraP11416 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC5.22□□□□□ -1.57
RaraP11416 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RaraP11416 Gm25560-201ENSMUST00000104606 176 ntBASIC5.22□□□□□ -1.57
RaraP11416 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm6565-201ENSMUST00000121217 438 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm13725-201ENSMUST00000122139 207 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.22□□□□□ -1.57
RaraP11416 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RaraP11416 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC5.22□□□□□ -1.57
RaraP11416 Gm26101-201ENSMUST00000157246 105 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm22601-201ENSMUST00000157595 250 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm5263-201ENSMUST00000163646 601 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm17153-201ENSMUST00000171314 490 ntBASIC5.22□□□□□ -1.57
RaraP11416 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.22□□□□□ -1.57
RaraP11416 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RaraP11416 Gm28097-201ENSMUST00000187333 366 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.22□□□□□ -1.57
RaraP11416 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.22□□□□□ -1.57
RaraP11416 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC5.22□□□□□ -1.57
RaraP11416 Gm43408-201ENSMUST00000198263 440 ntBASIC5.22□□□□□ -1.57
RaraP11416 Mir691-201ENSMUST00000199719 78 ntBASIC5.22□□□□□ -1.57
RaraP11416 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RaraP11416 Gm42665-201ENSMUST00000202100 586 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm44157-201ENSMUST00000204720 410 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm44925-201ENSMUST00000208879 2110 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC5.22□□□□□ -1.57
RaraP11416 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.22□□□□□ -1.57
RaraP11416 AV026068-231ENSMUST00000225862 482 ntBASIC5.22□□□□□ -1.57
RaraP11416 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm22997-201ENSMUST00000082845 107 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm25482-201ENSMUST00000083225 107 ntBASIC5.22□□□□□ -1.57
RaraP11416 Gm6361-201ENSMUST00000091031 435 ntBASIC5.22□□□□□ -1.57
RaraP11416 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RaraP11416 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RaraP11416 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RaraP11416 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RaraP11416 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RaraP11416 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.22□□□□□ -1.57
RaraP11416 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RaraP11416 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RaraP11416 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RaraP11416 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RaraP11416 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.21□□□□□ -1.57
RaraP11416 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RaraP11416 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RaraP11416 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RaraP11416 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RaraP11416 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RaraP11416 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RaraP11416 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RaraP11416 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.21□□□□□ -1.58
RaraP11416 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RaraP11416 Gm12782-201ENSMUST00000117519 727 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm11923-201ENSMUST00000118135 508 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm13537-201ENSMUST00000120467 267 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm12042-201ENSMUST00000120479 301 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm12486-201ENSMUST00000120887 541 ntBASIC5.21□□□□□ -1.58
RaraP11416 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC5.21□□□□□ -1.58
RaraP11416 Gm23959-201ENSMUST00000157208 324 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm16353-201ENSMUST00000159458 1223 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm4842-201ENSMUST00000183237 835 ntBASIC5.21□□□□□ -1.58
RaraP11416 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.21□□□□□ -1.58
RaraP11416 Gm36934-201ENSMUST00000192007 306 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm42579-201ENSMUST00000200512 734 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.21□□□□□ -1.58
RaraP11416 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RaraP11416 Gm44720-201ENSMUST00000206076 260 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm45207-201ENSMUST00000207469 145 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms