Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm18520-201ENSMUST00000174783 658 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm22122-201ENSMUST00000175147 200 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm18427-201ENSMUST00000195422 515 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Mir376a-201ENSMUST00000197584 68 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm32222-201ENSMUST00000203296 298 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm16419-201ENSMUST00000221057 625 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm6056-201ENSMUST00000221253 488 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm23138-201ENSMUST00000083365 103 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hoxd3P09027 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm37087-201ENSMUST00000192966 3309 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm37752-201ENSMUST00000193494 3309 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hoxd3P09027 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hoxd3P09027 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hoxd3P09027 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.38□□□□□ -1.71
Hoxd3P09027 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm37482-201ENSMUST00000194899 2791 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.38□□□□□ -1.71
Hoxd3P09027 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm27047-201ENSMUST00000183072 1819 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm24951-201ENSMUST00000102182 109 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Mir466p-201ENSMUST00000103925 89 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm24263-201ENSMUST00000104059 107 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm12125-201ENSMUST00000117261 736 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm14875-201ENSMUST00000120881 319 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm22596-201ENSMUST00000157601 316 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm23279-201ENSMUST00000157912 97 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm26354-201ENSMUST00000158221 129 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm20450-201ENSMUST00000173652 147 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm25615-201ENSMUST00000177836 94 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm2950-201ENSMUST00000185530 520 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm42526-201ENSMUST00000198956 393 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm44470-201ENSMUST00000203913 142 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm7726-201ENSMUST00000206241 231 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 AC165293.1-201ENSMUST00000219669 329 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.38□□□□□ -1.71
Hoxd3P09027 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm25987-201ENSMUST00000083234 107 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm23456-201ENSMUST00000083335 137 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Mir331-201ENSMUST00000083673 96 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hoxd3P09027 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hoxd3P09027 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hoxd3P09027 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Gm15583-201ENSMUST00000116191 3510 ntBASIC4.38□□□□□ -1.71
Hoxd3P09027 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd3P09027 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Hoxd3P09027 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms