Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col5a1O88207 Gm14607-201ENSMUST00000119119 491 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm14848-201ENSMUST00000121850 467 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm24210-201ENSMUST00000158263 133 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm16111-201ENSMUST00000162128 285 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col5a1O88207 Mir7017-201ENSMUST00000184894 62 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm29356-201ENSMUST00000186935 373 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm20561-201ENSMUST00000188131 292 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm21742-201ENSMUST00000189352 548 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm29475-201ENSMUST00000190767 312 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm20074-201ENSMUST00000208144 484 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col5a1O88207 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col5a1O88207 Gm23738-201ENSMUST00000082828 171 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col5a1O88207 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col5a1O88207 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Col5a1O88207 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col5a1O88207 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col5a1O88207 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col5a1O88207 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col5a1O88207 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col5a1O88207 Mir693-201ENSMUST00000102187 89 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm13880-201ENSMUST00000118421 474 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm26371-201ENSMUST00000157829 104 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm22803-201ENSMUST00000158049 283 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm17194-201ENSMUST00000164610 348 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col5a1O88207 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col5a1O88207 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col5a1O88207 Gm1833-201ENSMUST00000191608 682 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm43090-201ENSMUST00000202459 314 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm19253-201ENSMUST00000204279 307 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC2.47□□□□□ -2.01
Col5a1O88207 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC2.47□□□□□ -2.01
Col5a1O88207 AC126554.4-201ENSMUST00000221055 409 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 AC174082.1-201ENSMUST00000221106 307 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 AC124549.2-201ENSMUST00000224243 222 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm26458-201ENSMUST00000082832 128 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Gm22622-201ENSMUST00000082870 129 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 AF357341-201ENSMUST00000083088 75 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col5a1O88207 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col5a1O88207 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col5a1O88207 Gm43486-201ENSMUST00000196431 4339 ntBASIC2.47□□□□□ -2.01
Col5a1O88207 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
Col5a1O88207 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col5a1O88207 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC2.46□□□□□ -2.02
Col5a1O88207 Gm22752-201ENSMUST00000102083 109 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col5a1O88207 Gm24890-201ENSMUST00000104389 102 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Col5a1O88207 Gm11866-201ENSMUST00000120209 335 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.46□□□□□ -2.02
Col5a1O88207 Gm22361-201ENSMUST00000158435 176 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Gm27796-201ENSMUST00000183863 261 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Gm5268-201ENSMUST00000189212 940 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Gm38076-201ENSMUST00000193889 450 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Gm42516-201ENSMUST00000198691 767 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col5a1O88207 Gm44656-201ENSMUST00000208428 490 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Gm45474-201ENSMUST00000209471 408 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 AC159819.1-201ENSMUST00000213911 328 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 AC139294.2-201ENSMUST00000227159 285 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col5a1O88207 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col5a1O88207 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col5a1O88207 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col5a1O88207 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Col5a1O88207 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC2.46□□□□□ -2.02
Col5a1O88207 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Col5a1O88207 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Gm42537-201ENSMUST00000198260 2574 ntBASIC2.46□□□□□ -2.02
Col5a1O88207 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col5a1O88207 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.45□□□□□ -2.02
Col5a1O88207 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.45□□□□□ -2.02
Col5a1O88207 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.45□□□□□ -2.02
Col5a1O88207 Snord65-201ENSMUST00000104269 72 ntBASIC2.45□□□□□ -2.02
Col5a1O88207 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Col5a1O88207 Gm15161-201ENSMUST00000117340 387 ntBASIC2.45□□□□□ -2.02
Col5a1O88207 Gm11433-201ENSMUST00000118318 228 ntBASIC2.45□□□□□ -2.02
Col5a1O88207 Gm13687-201ENSMUST00000119857 282 ntBASIC2.45□□□□□ -2.02
Col5a1O88207 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.45□□□□□ -2.02
Col5a1O88207 Gm24601-201ENSMUST00000157970 143 ntBASIC2.45□□□□□ -2.02
Col5a1O88207 Gm23385-201ENSMUST00000158592 295 ntBASIC2.45□□□□□ -2.02
Col5a1O88207 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Col5a1O88207 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Col5a1O88207 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms