Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm23098-201ENSMUST00000157552 299 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm23352-201ENSMUST00000158428 64 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm24666-201ENSMUST00000158937 167 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm4761-201ENSMUST00000178086 582 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm23619-201ENSMUST00000178411 94 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm25474-201ENSMUST00000179052 94 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm22047-201ENSMUST00000179176 94 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Mir6899-201ENSMUST00000184798 64 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm5372-201ENSMUST00000187540 409 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm37641-201ENSMUST00000193837 239 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm44376-201ENSMUST00000197570 128 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm6929-201ENSMUST00000210930 468 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 AC153526.1-201ENSMUST00000219750 190 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm22740-201ENSMUST00000083439 109 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm8074-201ENSMUST00000095071 252 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm15180-201ENSMUST00000117745 492 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm14172-201ENSMUST00000118255 644 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm15613-201ENSMUST00000118396 326 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm11430-201ENSMUST00000121317 217 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm14101-201ENSMUST00000121502 473 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm14129-201ENSMUST00000122436 291 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm22769-201ENSMUST00000158367 98 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm25365-201ENSMUST00000158852 121 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm23816-201ENSMUST00000179617 132 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm28920-201ENSMUST00000189957 699 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm19498-201ENSMUST00000191128 331 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm38044-201ENSMUST00000192964 487 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Mir129b-201ENSMUST00000197461 65 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm19243-201ENSMUST00000198592 269 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm44887-201ENSMUST00000208980 178 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm18414-201ENSMUST00000210858 694 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm8423-201ENSMUST00000211387 607 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm17989-201ENSMUST00000211543 412 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm10042-201ENSMUST00000079884 78 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.28□□□□□ -1.88
Trav13d-3J3QMG8 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
Trav13d-3J3QMG8 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Mir690-201ENSMUST00000102110 109 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm12149-201ENSMUST00000117511 654 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm13349-201ENSMUST00000118436 411 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm14835-201ENSMUST00000119039 315 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm12640-201ENSMUST00000120097 310 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm13356-201ENSMUST00000121678 335 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm12755-201ENSMUST00000122297 282 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm23212-201ENSMUST00000122718 60 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm24244-201ENSMUST00000157317 130 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm24059-201ENSMUST00000157493 312 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms