Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Col6a5A6H584 Gm43718-201ENSMUST00000197524 1857 ntBASIC1.91□□□□□ -2.1
Col6a5A6H584 Gm45662-201ENSMUST00000210054 2098 ntBASIC1.9□□□□□ -2.1
Col6a5A6H584 Gm26080-201ENSMUST00000104069 131 ntBASIC1.9□□□□□ -2.1
Col6a5A6H584 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Col6a5A6H584 Gm38330-201ENSMUST00000192743 959 ntBASIC1.9□□□□□ -2.1
Col6a5A6H584 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC1.9□□□□□ -2.1
Col6a5A6H584 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC1.9□□□□□ -2.1
Col6a5A6H584 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.9□□□□□ -2.1
Col6a5A6H584 Gm7984-201ENSMUST00000060640 538 ntBASIC1.9□□□□□ -2.1
Col6a5A6H584 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Col6a5A6H584 Snora31-201ENSMUST00000083213 130 ntBASIC1.9□□□□□ -2.1
Col6a5A6H584 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
Col6a5A6H584 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
Col6a5A6H584 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Col6a5A6H584 Gm18337-201ENSMUST00000219023 5762 ntBASIC1.9□□□□□ -2.11
Col6a5A6H584 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Col6a5A6H584 Gm26077-201ENSMUST00000104064 123 ntBASIC1.9□□□□□ -2.11
Col6a5A6H584 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC1.9□□□□□ -2.11
Col6a5A6H584 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Col6a5A6H584 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Col6a5A6H584 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC1.9□□□□□ -2.11
Col6a5A6H584 Gm37162-201ENSMUST00000191708 551 ntBASIC1.9□□□□□ -2.11
Col6a5A6H584 Gm37543-201ENSMUST00000192443 1031 ntBASIC1.9□□□□□ -2.11
Col6a5A6H584 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.9□□□□□ -2.11
Col6a5A6H584 AC166358.6-201ENSMUST00000221834 1206 ntBASIC1.9□□□□□ -2.11
Col6a5A6H584 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC1.9□□□□□ -2.11
Col6a5A6H584 AC154594.1-201ENSMUST00000225171 1273 ntBASIC1.9□□□□□ -2.11
Col6a5A6H584 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Col6a5A6H584 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC1.9□□□□□ -2.11
Col6a5A6H584 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC1.9□□□□□ -2.11
Col6a5A6H584 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm20612-201ENSMUST00000176318 236 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm3852-201ENSMUST00000182781 264 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm27315-201ENSMUST00000183977 154 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 Trbv27-201ENSMUST00000193711 277 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm18453-201ENSMUST00000208000 626 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm18704-201ENSMUST00000219736 446 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 AC164424.1-201ENSMUST00000221690 170 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a5A6H584 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a5A6H584 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm23528-201ENSMUST00000104571 132 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm24930-201ENSMUST00000158315 83 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm27668-201ENSMUST00000184188 120 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 AC153975.1-201ENSMUST00000220087 926 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 AC115735.3-201ENSMUST00000227757 513 ntBASIC1.89□□□□□ -2.11
Col6a5A6H584 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a5A6H584 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col6a5A6H584 Gm14897-201ENSMUST00000118213 207 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm18486-201ENSMUST00000184040 298 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm28794-201ENSMUST00000185276 136 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm43406-201ENSMUST00000200356 334 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm43596-201ENSMUST00000202818 884 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC1.88□□□□□ -2.11
Col6a5A6H584 Snora23-201ENSMUST00000082517 184 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.88□□□□□ -2.11
Col6a5A6H584 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm22752-201ENSMUST00000102083 109 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col6a5A6H584 Ear-ps7-201ENSMUST00000161287 442 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm22254-201ENSMUST00000179186 110 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Mir6394-201ENSMUST00000184738 99 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm28628-201ENSMUST00000187006 264 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm28629-201ENSMUST00000187309 263 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm5653-201ENSMUST00000223393 1337 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Gm37664-201ENSMUST00000194607 3813 ntBASIC1.88□□□□□ -2.11
Col6a5A6H584 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a5A6H584 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Col6a5A6H584 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Col6a5A6H584 Mir499-201ENSMUST00000102357 79 ntBASIC1.87□□□□□ -2.11
Col6a5A6H584 Gm14589-201ENSMUST00000121640 727 ntBASIC1.87□□□□□ -2.11
Col6a5A6H584 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col6a5A6H584 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.87□□□□□ -2.11
Col6a5A6H584 Gm8902-201ENSMUST00000174341 1096 ntBASIC1.87□□□□□ -2.11
Col6a5A6H584 Mir466m-201ENSMUST00000175052 84 ntBASIC1.87□□□□□ -2.11
Col6a5A6H584 Gm19177-201ENSMUST00000204520 613 ntBASIC1.87□□□□□ -2.11
Col6a5A6H584 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC1.87□□□□□ -2.11
Col6a5A6H584 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.87□□□□□ -2.11
Col6a5A6H584 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC1.87□□□□□ -2.11
Col6a5A6H584 AC144628.1-201ENSMUST00000227943 466 ntBASIC1.87□□□□□ -2.11
Col6a5A6H584 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms