Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm23325-201ENSMUST00000157422 129 ntBASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm22252-201ENSMUST00000179316 79 ntBASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm37866-201ENSMUST00000191950 696 ntBASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm45105-201ENSMUST00000207824 397 ntBASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm23925-201ENSMUST00000082471 132 ntBASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv5A0A0B4J1G9 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm9597-202ENSMUST00000227632 1387 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm26341-201ENSMUST00000104561 134 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm15037-201ENSMUST00000120358 259 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm22026-201ENSMUST00000122735 281 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm22885-201ENSMUST00000157410 107 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm25427-201ENSMUST00000157605 103 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm26487-201ENSMUST00000158022 94 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm22330-201ENSMUST00000158068 115 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm22766-201ENSMUST00000158372 99 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm22693-201ENSMUST00000175049 442 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm26866-201ENSMUST00000180414 802 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm37417-201ENSMUST00000195257 454 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm7751-201ENSMUST00000212868 709 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 AC091783.5-201ENSMUST00000224928 671 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm6030-201ENSMUST00000078768 402 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Snora7a-201ENSMUST00000082629 140 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv5A0A0B4J1G9 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Mir667-201ENSMUST00000102441 92 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm25420-201ENSMUST00000104216 127 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm25727-201ENSMUST00000104522 131 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm23609-201ENSMUST00000104542 127 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm15125-201ENSMUST00000116185 800 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm14469-201ENSMUST00000118363 202 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm11829-201ENSMUST00000121003 282 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm23887-201ENSMUST00000122683 172 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm27773-201ENSMUST00000184087 78 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Mir6401-201ENSMUST00000184499 109 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Npn2-202ENSMUST00000189275 235 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm43897-201ENSMUST00000204019 309 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm8942-201ENSMUST00000217892 400 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm19563-201ENSMUST00000222031 270 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.28□□□□□ -2.04
Trbv5A0A0B4J1G9 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
Trbv5A0A0B4J1G9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.05
Trbv5A0A0B4J1G9 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trbv5A0A0B4J1G9 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms