Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm19641-201ENSMUST00000188432 417 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm20832-201ENSMUST00000189076 665 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm29330-201ENSMUST00000190032 699 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm28241-201ENSMUST00000190916 235 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm31511-201ENSMUST00000193134 657 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm30638-201ENSMUST00000195570 656 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm36728-201ENSMUST00000195782 665 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm37836-201ENSMUST00000195875 175 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Mir5121-201ENSMUST00000198528 74 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm33626-201ENSMUST00000206790 828 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm23242-201ENSMUST00000083055 107 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm23464-201ENSMUST00000083145 147 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm23875-201ENSMUST00000083711 318 ntBASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav13d-1A0A075B606 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm25726-201ENSMUST00000104529 129 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm13803-201ENSMUST00000117547 489 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm15988-201ENSMUST00000118677 367 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm13232-201ENSMUST00000121816 632 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm13868-201ENSMUST00000122411 294 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm23023-201ENSMUST00000158767 109 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm17162-201ENSMUST00000168538 473 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm3370-201ENSMUST00000171785 500 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm22633-201ENSMUST00000179834 107 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm28781-201ENSMUST00000185760 696 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm29307-201ENSMUST00000187367 696 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm29339-201ENSMUST00000189613 696 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm29192-201ENSMUST00000190942 377 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm29407-201ENSMUST00000191468 696 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm38150-201ENSMUST00000192996 452 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Trbv24-201ENSMUST00000194614 347 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm8069-201ENSMUST00000197887 154 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm4734-201ENSMUST00000200117 777 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 AC109212.1-201ENSMUST00000215561 427 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Mecom-201ENSMUST00000061088 348 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm23650-201ENSMUST00000083355 70 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm22155-201ENSMUST00000083836 162 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm23741-201ENSMUST00000097237 171 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Olfr713-201ENSMUST00000098139 975 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav13d-1A0A075B606 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Gm43648-201ENSMUST00000197775 2485 ntBASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Gm22834-201ENSMUST00000102021 79 ntBASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Gm11221-201ENSMUST00000117230 597 ntBASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Gm14628-201ENSMUST00000117508 635 ntBASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Gm11849-201ENSMUST00000121293 261 ntBASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Gm14364-201ENSMUST00000129209 267 ntBASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.28□□□□□ -1.88
Trav13d-1A0A075B606 Gm25637-201ENSMUST00000157529 107 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms