Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm22330-201ENSMUST00000158068 115 ntBASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Gm43489-201ENSMUST00000196810 993 ntBASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Gm18043-201ENSMUST00000216741 739 ntBASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Gm5176-202ENSMUST00000220267 583 ntBASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.06□□□□□ -2.08
Trav6-6A0A075B603 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Mir499-201ENSMUST00000102357 79 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm22939-201ENSMUST00000103958 131 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm15106-201ENSMUST00000119691 821 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm14506-201ENSMUST00000121165 536 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm23325-201ENSMUST00000157422 129 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm27783-201ENSMUST00000183534 105 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm43669-201ENSMUST00000198229 436 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm45687-201ENSMUST00000209454 155 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm8681-201ENSMUST00000219115 618 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav6-6A0A075B603 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm24951-201ENSMUST00000102182 109 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm15382-201ENSMUST00000118011 537 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm11229-201ENSMUST00000121993 437 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm13487-201ENSMUST00000122240 864 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm12755-201ENSMUST00000122297 282 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm25979-201ENSMUST00000157177 138 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm22277-201ENSMUST00000157204 277 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm25898-201ENSMUST00000158303 106 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm21809-201ENSMUST00000178495 468 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm32340-201ENSMUST00000192883 259 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm43405-201ENSMUST00000198642 337 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm5265-201ENSMUST00000076828 342 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm23447-201ENSMUST00000082798 163 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav6-6A0A075B603 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav6-6A0A075B603 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms