Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5538W4VSP6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm5538W4VSP6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm5538W4VSP6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Gm5538W4VSP6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm5538W4VSP6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm5538W4VSP6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm5538W4VSP6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Gm3375-201ENSMUST00000203929 796 ntBASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5538W4VSP6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5538W4VSP6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Timm23-208ENSMUST00000226683 750 ntBASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5538W4VSP6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Gm7638-201ENSMUST00000121348 967 ntBASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Gm21814-202ENSMUST00000203277 873 ntBASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5538W4VSP6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms