Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb2S4R1M3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb2S4R1M3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb2S4R1M3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb2S4R1M3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb2S4R1M3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb2S4R1M3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb2S4R1M3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb2S4R1M3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb2S4R1M3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Gm8520-201ENSMUST00000186517 868 ntBASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb2S4R1M3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms