Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crlf3Q9Z2L7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Gm12933-201ENSMUST00000120203 872 ntBASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf3Q9Z2L7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Crlf3Q9Z2L7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Crlf3Q9Z2L7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Crlf3Q9Z2L7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.44■□□□□ 0.38
Crlf3Q9Z2L7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Crlf3Q9Z2L7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crlf3Q9Z2L7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Crlf3Q9Z2L7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crlf3Q9Z2L7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crlf3Q9Z2L7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crlf3Q9Z2L7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Crlf3Q9Z2L7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Crlf3Q9Z2L7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crlf3Q9Z2L7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Crlf3Q9Z2L7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms