Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Gm9013-201ENSMUST00000132939 882 ntBASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Gm22697-201ENSMUST00000175194 63 ntBASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scn8aQ9WTU3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Scn8aQ9WTU3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn8aQ9WTU3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 Gm5587-201ENSMUST00000206270 674 ntBASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn8aQ9WTU3 AA414768-201ENSMUST00000121924 1257 ntBASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn8aQ9WTU3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn8aQ9WTU3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Gm37722-201ENSMUST00000193757 208 ntBASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.35■□□□□ 0.37
Scn8aQ9WTU3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms