Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm29518-201ENSMUST00000190858 372 ntBASIC16.19■□□□□ 0.18
Lhx6Q9R1R0 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.19■□□□□ 0.18
Lhx6Q9R1R0 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC16.19■□□□□ 0.18
Lhx6Q9R1R0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx6Q9R1R0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx6Q9R1R0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx6Q9R1R0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Gm12439-201ENSMUST00000117162 365 ntBASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx6Q9R1R0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lhx6Q9R1R0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 BC021767-201ENSMUST00000126387 1716 ntBASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx6Q9R1R0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx6Q9R1R0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx6Q9R1R0 Gm37965-201ENSMUST00000195304 1362 ntBASIC16.14■□□□□ 0.17
Lhx6Q9R1R0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx6Q9R1R0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lhx6Q9R1R0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx6Q9R1R0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms