Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40aQ9R1C7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40aQ9R1C7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40aQ9R1C7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40aQ9R1C7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40aQ9R1C7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.98■□□□□ 0.63
Prpf40aQ9R1C7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf40aQ9R1C7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Prpf40aQ9R1C7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf40aQ9R1C7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf40aQ9R1C7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Gm13401-201ENSMUST00000117074 291 ntBASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40aQ9R1C7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms