Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Gm24513-201ENSMUST00000174964 138 ntBASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Gm10175-201ENSMUST00000086013 645 ntBASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a4Q9QZR9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a4Q9QZR9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a4Q9QZR9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a4Q9QZR9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a4Q9QZR9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a4Q9QZR9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a4Q9QZR9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col4a4Q9QZR9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a4Q9QZR9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col4a4Q9QZR9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a4Q9QZR9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a4Q9QZR9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a4Q9QZR9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a4Q9QZR9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.33■□□□□ 0.37
Col4a4Q9QZR9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a4Q9QZR9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.33■□□□□ 0.37
Col4a4Q9QZR9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Col4a4Q9QZR9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a4Q9QZR9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.33■□□□□ 0.36
Col4a4Q9QZR9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a4Q9QZR9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a4Q9QZR9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a4Q9QZR9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a4Q9QZR9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a4Q9QZR9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Col4a4Q9QZR9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a4Q9QZR9 Gm27397-201ENSMUST00000184997 107 ntBASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a4Q9QZR9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a4Q9QZR9 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms