Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim44Q9QXA7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim44Q9QXA7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim44Q9QXA7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim44Q9QXA7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim44Q9QXA7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim44Q9QXA7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim44Q9QXA7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim44Q9QXA7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim44Q9QXA7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.05■□□□□ 0.8
Trim44Q9QXA7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim44Q9QXA7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Trim44Q9QXA7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Idnk-204ENSMUST00000226010 1898 ntBASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim44Q9QXA7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim44Q9QXA7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
Trim44Q9QXA7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim44Q9QXA7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Trim44Q9QXA7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim44Q9QXA7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim44Q9QXA7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim44Q9QXA7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim44Q9QXA7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim44Q9QXA7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim44Q9QXA7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms