Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Chaf1aQ9QWF0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chaf1aQ9QWF0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chaf1aQ9QWF0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chaf1aQ9QWF0 Gm29791-202ENSMUST00000207888 369 ntBASIC19.33■□□□□ 0.68
Chaf1aQ9QWF0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.33■□□□□ 0.68
Chaf1aQ9QWF0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chaf1aQ9QWF0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chaf1aQ9QWF0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chaf1aQ9QWF0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chaf1aQ9QWF0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.33■□□□□ 0.68
Chaf1aQ9QWF0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chaf1aQ9QWF0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Chaf1aQ9QWF0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chaf1aQ9QWF0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Flg-201ENSMUST00000050758 1488 ntBASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Gm11927-201ENSMUST00000118472 759 ntBASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Gm5408-201ENSMUST00000197998 747 ntBASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Chaf1aQ9QWF0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chaf1aQ9QWF0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Mir2861-201ENSMUST00000175539 82 ntBASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chaf1aQ9QWF0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chaf1aQ9QWF0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms