Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 AW822252-206ENSMUST00000208904 237 ntBASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Mir8098-201ENSMUST00000184011 137 ntBASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scn5aQ9JJV9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Gm28659-201ENSMUST00000188013 759 ntBASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Gm43347-201ENSMUST00000200226 580 ntBASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn5aQ9JJV9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scn5aQ9JJV9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn5aQ9JJV9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn5aQ9JJV9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn5aQ9JJV9 Gm5864-201ENSMUST00000202263 970 ntBASIC17.8■□□□□ 0.44
Scn5aQ9JJV9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn5aQ9JJV9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn5aQ9JJV9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn5aQ9JJV9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn5aQ9JJV9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.78■□□□□ 0.44
Scn5aQ9JJV9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Scn5aQ9JJV9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Scn5aQ9JJV9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.77■□□□□ 0.43
Scn5aQ9JJV9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn5aQ9JJV9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Scn5aQ9JJV9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Scn5aQ9JJV9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn5aQ9JJV9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn5aQ9JJV9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn5aQ9JJV9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.76■□□□□ 0.43
Scn5aQ9JJV9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn5aQ9JJV9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn5aQ9JJV9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.76■□□□□ 0.43
Scn5aQ9JJV9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn5aQ9JJV9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms